Limosilactobacillus fermentum F-6: LBFF_1638
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Entry
LBFF_1638 CDS
T02669
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lff
Limosilactobacillus fermentum F-6
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lff03016
]
LBFF_1638 (truA)
Enzymes [BR:
lff01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LBFF_1638 (truA)
Transfer RNA biogenesis [BR:
lff03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LBFF_1638 (truA)
Prokaryotic type
LBFF_1638 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DevR
DUF2344
Motif
Other DBs
NCBI-ProteinID:
AGL89528
LinkDB
All DBs
Position
complement(1653843..1654619)
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AA seq
258 aa
AA seq
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MHRYKITFAYDGSNFAGFQVQPGERTVQQVLERAVNKIAKKPQPPLMVFGSGRTDAGVHA
LGQVAHFDLPYQIPGPSLVRALNSSLPLDVLVKEATEVAPDFHARFDAHHKRYRYRVVGG
EFTNPFKRNYTGHYKYPVDVERMQTAAQDFVGEHDFTSFVASGSQATSNVRRIDEVTVVR
DEENDEVVFDFVGNGFLYNQVRIMVAFLLEIGNGRRPVDDVMRVMKAKNRDLARGTAPAS
GLYLVEVTYDSPANSQND
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
gtgcaccgttataagataacctttgcctacgacggcagtaactttgctggctttcaggtt
cagcccggtgagcgaaccgttcagcaggtcctcgaacgggccgttaataagatcgctaaa
aaaccacaaccgccgctaatggtcttcggttccggacgtaccgacgctggcgttcacgcc
ctcggtcaggtcgcccacttcgacttaccataccaaattccggggccgtccttggtgcgg
gccctgaattcaagcctccccctcgacgtcttggtgaaggaggcaacagaagtggcgccg
gactttcacgcccgctttgatgcccaccataagcgctaccgctaccgggtggtggggggt
gagttcaccaacccctttaagcgtaattacaccggccattacaagtacccggtcgacgtt
gaacggatgcaaacagcggcccaggacttcgttggtgaacacgacttcacctcctttgtt
gcctctgggtcgcaagcgaccagcaacgttcgccgcatcgatgaggtaaccgtggttcgg
gatgaagaaaacgacgaggtggtctttgacttcgttggtaatggttttttgtataaccag
gtccggattatggtggccttcttactggagattggtaacggccgccgccccgtcgatgac
gttatgcgggtaatgaaggccaagaaccgcgatctcgcccggggaacggcgccggccagt
ggcttatacctggtggaagtgacctatgattccccggcgaattcacaaaatgattga
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