Limosilactobacillus fermentum F-6: LBFF_1998
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Entry
LBFF_1998 CDS
T02669
Name
(GenBank) putative DNA-3-methyladenine glycosylase II
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
lff
Limosilactobacillus fermentum F-6
Pathway
lff03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lff00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBFF_1998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lff03400
]
LBFF_1998
Enzymes [BR:
lff01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
LBFF_1998
DNA repair and recombination proteins [BR:
lff03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LBFF_1998
Prokaryotic type
LBFF_1998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
AGL89888
LinkDB
All DBs
Position
complement(2024054..2024683)
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AA seq
209 aa
AA seq
DB search
MSPYQAFFTNRPTEEIAKDLLGRELSYQSPAGRVAGLIVETEAYLGEQDSASHAYNGRRT
NYSEALYGAPGTIYVYQIRAHYCFDVVVQDQEEPQGILIRALEPTEGLELMEERRHQVGV
NLTNGPGKVGQALGLVDRHLDGQPLETAPLSIDLTKRRAPQSIGVSSRVGVNQRGSHGNA
PLRFFVDHNPYVSKMLKRDSDLVNHGWGD
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgtcaccataccaagcctttttcacgaatcgccccaccgaagagatcgccaaggacctc
ttggggcgtgaactcagttaccaaagccccgcggggagagtggcgggcttgattgttgaa
accgaggcgtacttgggtgagcaggattcggcttcccacgcctacaacgggcggcggacc
aactattccgaggccctgtacggggcgccaggaacgatctacgtctaccaaatccgggct
cactactgctttgacgtggtcgtgcaagaccaagaagaaccccagggaattttgattcgg
gcactagagcccacggaggggcttgaattaatggaggagcgccgtcatcaggtcggggtg
aacttaactaacgggcccggcaaggttgggcaggccctggggttagtggatcgccactta
gatggtcagccgctagaaacggcgccgctttcgattgatttaaccaagcggcgggcgccc
caatcgattggggtcagttcccgggtgggggtcaaccaaagggggagccacggtaacgcc
ccgttgcgcttctttgtcgaccacaacccctacgtttccaagatgctaaagcgcgattcc
gacctggttaaccacggatggggggattga
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