Limibacterium fermenti: ABNK31_01060
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Entry
ABNK31_01060 CDS
T10860
Name
(GenBank) ATP-binding protein
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
lfg Limibacterium fermenti
Pathway
lfg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABNK31_01060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfg03400
]
ABNK31_01060
Enzymes [BR:
lfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABNK31_01060
DNA repair and recombination proteins [BR:
lfg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABNK31_01060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLFN_AlbA_2
HATPase_c_4
HTH_24
HTH_20
MarR
LexA_DNA_bind
Tau95
HTH_HVO_0163_N
SPT6_acidic
MarR_2
HTH_12
HTH_69
RPA_C
Penicillinase_R
HTH_11
Ribosomal_L6e
HTH_5
BLACT_WH
HTH_Crp_2
DUF1870
Motif
Other DBs
NCBI-ProteinID:
XGS83549
LinkDB
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Position
complement(236063..237559)
Genome browser
AA seq
498 aa
AA seq
DB search
MITQQKILQLLADTECHRVERTTSKNDMDKFCQAICAFSNDLSGDGKSGYLMIGAYDNGE
LSGLKVDDTLLLKIANIRTDGNILPQPLMTVEKFTFEGGELLVAEVQPSEFPPVRYRGRV
WVRVGPRKSPASEMEEKILTERRLSNVRTYDAKPCLGASLKDLDISLIKKEFLPKAVAED
ILAEDKRSIEEQLASLGFFDLRYNCPTVGAIVLFGNNPERHVHGSYVQYVRFKGIDRAGD
IIHEFKFDGNLCKSLPKIDTFIETSVSTKRPIPVSVLREKIVSTYPYWATRELLMNAIMH
RDYDSNSPIQFYEYDDRIEIQNPGGLYGKVSPENFPNVSDYRNPFIAEAMKVLGYVNRFS
RGVYRVQKELKENGNGEAKFDFSLRTAFRVVENISKKYFEEGFGADNPENTKKAQRNNQE
QPENNQKTTRKQPENNQKTIKDEIVELIKENPNITRKELENLLNRTPNSIKYHLEQLTKK
GIIKREGSDRVGKWIVIE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgattacccagcaaaaaatacttcaactcctcgctgatactgaatgtcatagagtagag
cggacaacgtccaaaaatgatatggataagttttgtcaggcgatatgtgctttttccaac
gacctttcgggtgatggaaagagtggctatttgatgatcggtgcctatgataacggagag
ttgagtggattgaaggtagatgataccttattgctgaagattgccaatatccgaacggat
ggaaatattcttcctcaaccgttgatgactgttgagaagtttacttttgaaggtggagaa
ctgcttgttgctgaagttcagccgtctgaatttcctccggtacgttatagaggacgtgtt
tgggtgcgtgttggaccgcggaaaagcccggcttccgaaatggaggagaaaattttgact
gaaagacgattgtcgaatgttcgcacgtatgatgctaaaccatgtcttggtgcttcgttg
aaagatttagatatatcgcttatcaagaaagaatttctgcctaaagcggttgcggaagat
atattggcggaagacaaacgttccatagaggaacaattagcttcgcttggctttttcgat
ttgaggtataattgccctactgttggtgcaattgttttgtttggaaataatccggagaga
catgtgcatggttcgtatgttcagtatgtacgtttcaaaggaatagaccgggcaggcgat
attattcatgaatttaagtttgacggaaatttatgtaaatcacttccgaaaatagataca
tttatcgaaacgagtgtatcgactaagcgtcctattccggtgagtgttctgcgggaaaag
attgtctccacctatccttattgggcgactcgtgagcttttaatgaacgccatcatgcac
cgtgattatgattcgaattcccctattcagttttatgaatatgacgaccgaattgaaatt
caaaatccgggaggattgtatggtaaggtcagtccggaaaacttccccaacgtaagtgat
taccggaatccatttattgcagaagcaatgaaagttttgggatatgtgaaccgatttagt
agaggcgtctatcgggttcaaaaggaattgaaagaaaatggaaatggagaagccaaattt
gatttctctttgcgtaccgctttcagggtagtggaaaatatatcaaagaagtatttcgag
gaaggttttggagctgacaacccggaaaatacaaaaaaagcacaaagaaacaatcaagag
caaccagaaaacaaccagaaaacaaccagaaaacaaccagaaaacaaccagaaaacaata
aaagatgaaatagttgaactcatcaaggagaatccgaacatcactcgtaaagagttggaa
aatcttttaaaccgaactccgaatagtataaaataccatttggagcaactaacaaaaaaa
ggaataatcaaacgagaaggttcagaccgagtcggcaaatggatcgtaattgaataa
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