Limibacterium fermenti: ABNK31_01260
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Entry
ABNK31_01260 CDS
T10860
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
lfg Limibacterium fermenti
Pathway
lfg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABNK31_01260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfg03021
]
ABNK31_01260
Transcription machinery [BR:
lfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABNK31_01260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
GerE
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_23
HTH_28
Motif
Other DBs
NCBI-ProteinID:
XGS83586
UniProt:
A0ACH2UF27
LinkDB
All DBs
Position
complement(279861..280430)
Genome browser
AA seq
189 aa
AA seq
DB search
MDINHFSLDQINKMDAAAFRALYKAYYKALVGYSIQMVGEVEAAEDIVGTFFTTLWEKKL
SFRSLISLQTYLYNSVRNASLNYLKHKDIESDHLQKVADHYKEHYFAGEDADDFFSEEIY
RLLFQAIDALPKRCREVFLLAMEGKKNDEIAAILQVSLETVKTQKKRGMSSLRTKLINQS
LVFLEFLLL
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaatcatttctctttggatcagattaataaaatggatgcggcggctttccgt
gcgctttataaggcctattataaagcgttggtgggctattccatacagatggtcggcgaa
gtggaagccgcagaagacattgtcggaaccttctttacgactctttgggagaagaaatta
tcttttcgatcattaatatccctgcaaacctatctttacaattcggtacggaacgcttcg
ttgaattatcttaagcataaagatattgagagcgaccacctacagaaagtcgcagaccat
tataaagagcattatttcgcaggagaggacgccgacgattttttcagtgaggaaatctat
cgtttgctttttcaggctatcgatgccctgccgaaacggtgcagggaagttttcctgctt
gccatggaagggaagaaaaatgacgagattgcggcgatacttcaggtttcactggaaacg
gtaaagacccaaaaaaaacgaggaatgtcttccctccggacgaagttaatcaatcaatcc
ctggtattccttgagtttttacttttataa
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