Limibacterium fermenti: ABNK31_01420
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Entry
ABNK31_01420 CDS
T10860
Name
(GenBank) ABC transporter ATP-binding protein
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
lfg Limibacterium fermenti
Pathway
lfg02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ABNK31_01420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lfg02000
]
ABNK31_01420
Enzymes [BR:
lfg01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
ABNK31_01420
Transporters [BR:
lfg02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
ABNK31_01420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_25
DEAD
RsgA_GTPase
AAA_29
AAA_22
ABC_ATPase
AAA_24
AAA_16
NACHT
nSTAND3
SbcC_Walker_B
AAA_30
AAA_18
nSTAND1
Motif
Other DBs
NCBI-ProteinID:
XGS83613
LinkDB
All DBs
Position
complement(310946..312784)
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AA seq
612 aa
AA seq
DB search
MKGIIRLIKRFLLSYKKYVVLTFGFNILTAFLNVFSLATIIPILQVLFKVNTGTYKFIEW
NAPGSSFVDVVLNNLNWYVTQIMDMYGNTYTLMILSVFLVMMTILKTGTAYFGSYFIIPI
RTGVVRDIRNQINDKILKLPIGFFSEERKGDILSRISGDVNEVENSVMSSLDMLFKNPIL
MLIYFITMVLLSWQLTLFVLVLLPLMGYIMGTVGKTLKKSSFEAQNKWGELMSQVEETLS
GLRVIKAFNAEDDISKRFHSGSNEFRRMSNRIARRQNLAHPMSELLGTLTIAVVLWFGGS
LILKGSTMIDAATFIYYLTIFYSIINPAKEFSRSAYAVQRGLASMERIDKILDAENEKSY
TTRNTPLHFKKDIEYKDVWFKYNSEWVIKGINLHIEKGKTIALVGQSGSGKSTLADLLPR
FYDIQEGGIYIDDTDIKDTGLQDLRSLFGYVNQEAILFNDTIYNNIAFGAKNKTEAQVVE
AARIANAHEFIIATPKGYQTNIGDRGGKLSGGQRQRISIARAILKDPQILILDEATSALD
SDSERLVQAALEHLLKNRTTIIIAHRLSTVKNADMIYVLQDGQIVESGKHDTLYALDGYY
TKLCKIQGILKA
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtataataagactcataaaacgttttttgctctcttataaaaagtatgtagtt
cttacttttggtttcaatatcctcaccgccttcctgaatgttttttcattggcgacaatt
atcccaatacttcaagtgctctttaaagtaaatacgggcacttataaatttatagaatgg
aacgctcctggcagttcgtttgtggatgttgttttaaacaatctgaattggtatgtgacg
caaataatggatatgtatggcaatacctatacattaatgattttatccgttttcttggta
atgatgaccatcctcaaaacaggcacagcctatttcggatcgtatttcattattccaata
aggactggcgtcgtgcgcgacatacgtaatcaaattaatgataaaatactgaaacttccc
atcggatttttttcggaagaaagaaaaggagatatcttatcacgcatatcgggcgatgta
aatgaagtggaaaactcggtgatgagttcgctggatatgctgtttaagaatcctattctt
atgcttatttattttatcacgatggttttgttgagttggcaactcactttatttgttctc
gtgcttcttcctttaatgggatatattatgggaacggtagggaaaacccttaagaaaagt
tctttcgaagcccagaataaatggggggaattaatgtcgcaagtggaggaaacactgagt
ggattaagggtgattaaagcgttcaatgccgaagatgatatatcaaaacggtttcacagc
ggcagcaatgagttccgacggatgtcgaaccggattgcgcgccggcaaaacctagcccat
cccatgagcgaattgctgggaactctcaccattgcggttgtgctttggtttggcggttct
cttattttaaagggttccaccatgatcgatgccgcaacctttatttactatctaactatt
ttctatagcatcattaatccggcaaaggaattttcgagatcggcgtatgctgtccaacgg
ggactggcatccatggaaagaatcgacaagatattggatgcagaaaatgaaaaatcttac
accacccgcaacacaccgttacatttcaagaaagatattgaatataaagacgtgtggttt
aaatataattcggagtgggtaatcaaaggaatcaatctgcatattgaaaaaggaaaaacc
attgcgcttgtcggtcaatcgggatcgggcaaatcgacgcttgccgatttgttacctcga
ttttacgatattcaagaaggcgggatctatatcgatgatacggatataaaagatacgggg
ttgcaggatttgcgttcgcttttcggatacgtaaatcaggaagctattcttttcaatgat
acgatatacaataatattgctttcggcgctaaaaacaaaaccgaagcacaggtcgttgaa
gccgcccggatagcgaatgcccatgagtttattatcgccacgcctaaaggctatcaaacg
aatatcggtgaccgtgggggaaagctatcgggaggacaacgccaacgcatcagcatcgcg
cgagccatcttaaaggatcctcaaatacttattctggatgaagcgacatcagcattagac
tccgactcggagagacttgtacaggcagcattggaacatttattaaagaaccgcaccacg
attatcattgcccaccgcctatcgacggtgaaaaatgccgacatgatttatgtattacaa
gacggacaaatcgtagagtcgggcaaacacgacaccctttatgctttggacggttactat
acgaaactctgcaaaatacaaggaattctgaaggcttaa
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