Limibacterium fermenti: ABNK31_01800
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Entry
ABNK31_01800 CDS
T10860
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
lfg Limibacterium fermenti
Pathway
lfg00521
Streptomycin biosynthesis
lfg00523
Polyketide sugar unit biosynthesis
lfg00541
Biosynthesis of various nucleotide sugars
lfg01100
Metabolic pathways
lfg01110
Biosynthesis of secondary metabolites
lfg01250
Biosynthesis of nucleotide sugars
Module
lfg_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
ABNK31_01800 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ABNK31_01800 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ABNK31_01800 (rfbC)
Enzymes [BR:
lfg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
ABNK31_01800 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
XGS83681
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Position
403027..403599
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AA seq
190 aa
AA seq
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MNVIQTEIDGVVIIEPNVFGDDRGNFFESFSEKVFRENVCNTRFIQDNESKSRYGVLRGL
HFQKGEFAQSKLVRVVNGRVLDVAVDIRKGSPTFGRHVAVELTGENKRQFFVPRGFAHGF
VVLSDEAVFQYKCDNYYAPQEEGAIAWNDPDLAIDWKVRPEEILLSEKDQKHPLLKDAPY
LFDFQTNYYG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttatacagacggaaatagacggcgttgttatcattgaacctaatgtattcgga
gatgatcgagggaatttctttgaatcgttttcggaaaaggtttttcgagaaaacgtatgt
aatacgcgatttatacaggataatgaatctaagtctcggtatggcgtgttaagaggatta
cattttcaaaaaggagaatttgcgcaatccaaactggtccgggttgtaaacggccgtgta
ttggatgtcgccgtggatattcgaaaaggctcccctacttttggtcgtcacgttgccgta
gaattgacaggagagaataaacgacagttttttgtgcctcgtggatttgcgcacggtttt
gtcgtattgagcgatgaagccgtttttcaatataaatgtgataattattatgctccccag
gaagaaggagccattgcgtggaatgatccggatttagccatagattggaaagtacgtccg
gaagaaatccttttatcggaaaaagatcaaaagcatcctttgctgaaagatgctccttac
ttattcgattttcaaacaaactattatggataa
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