Limibacterium fermenti: ABNK31_02485
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Entry
ABNK31_02485 CDS
T10860
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lfg Limibacterium fermenti
Pathway
lfg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABNK31_02485 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfg03019
]
ABNK31_02485 (groL)
03110 Chaperones and folding catalysts [BR:
lfg03110
]
ABNK31_02485 (groL)
03029 Mitochondrial biogenesis [BR:
lfg03029
]
ABNK31_02485 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lfg04147
]
ABNK31_02485 (groL)
Enzymes [BR:
lfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
ABNK31_02485 (groL)
Messenger RNA biogenesis [BR:
lfg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ABNK31_02485 (groL)
Chaperones and folding catalysts [BR:
lfg03110
]
Heat shock proteins
HSP60 / Chaperonin
ABNK31_02485 (groL)
Mitochondrial biogenesis [BR:
lfg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
ABNK31_02485 (groL)
Exosome [BR:
lfg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ABNK31_02485 (groL)
Exosomal proteins of other body fluids (saliva and urine)
ABNK31_02485 (groL)
Exosomal proteins of breast cancer cells
ABNK31_02485 (groL)
Exosomal proteins of colorectal cancer cells
ABNK31_02485 (groL)
Exosomal proteins of bladder cancer cells
ABNK31_02485 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
XGS83808
LinkDB
All DBs
Position
551965..553599
Genome browser
AA seq
544 aa
AA seq
DB search
MAKEIKFEMDARDLLKEGVDALADAVKVTLGPKGRNVIIDKKYGAPQITKDGVTVAKEIE
LEDPFQNMGAQLVKEVATKTNDDAGDGTTTATLLAQSIIRVGLKNVTAGANPMDLKRGID
IAVAKVVENLRSQAVEVGNDLKKIENVAKISANGDETIGKLIAEAMQKVSKEGVITVEEA
KGTDTYVDVVEGMQFDRGYISPYFVTDTESMQVEFENPQILIHDKKISAIKDLLPILEKS
VQTGKPLLIIAEDIDSEALTTLVVNRLRGSLKIAAVKAPGFGDRRKEMLEDIAILTGGTV
ISEEKGLTLEHATLDMLGSAEKVTIDKDTTTIVNGVGDKETIHNRVAQIRAQIEKTTSDY
DREKLQERLAKLSGGVAVLYVGAPSEVEMKEKKDRVDDALSATRAAVEEGTVPGGGVAYI
RAIEALEGLKGANEDETTGIEIVKRAIEEPLRQIVANSGKEGAVIVQKVREGKADYGYNA
RNDQFENLYETGVIDPAKVTRVALENAASIAGMFLTTECVITDKKEDNPAPQMPMGGGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaaattaaatttgaaatggatgcccgcgatttactcaaagaaggagtggac
gcgttggcggatgcagtaaaagtaactttgggccctaaaggccgcaatgtgatcatcgac
aaaaaatatggcgctccccaaattacgaaagacggggtgaccgtggcaaaagaaatagaa
ttggaggatcccttccaaaacatgggcgcccaactggtaaaggaagtggctaccaaaacc
aatgacgatgcaggcgacggaacaaccaccgctaccttgctggctcaatccatcatcagg
gtaggattgaagaacgtaaccgccggcgctaatccgatggatttgaagcgcggaatagac
attgccgtggccaaagtggtggaaaacctcagaagccaggctgtagaagtcggcaacgat
ttgaagaaaatcgaaaatgtggccaagatctcggcgaatggcgatgaaaccatcggtaaa
ctcattgccgaagccatgcaaaaagtcagcaaagaaggcgtgattaccgtcgaagaagcc
aaaggtaccgatacgtatgtagatgtcgtagaagggatgcagttcgatcgcggatatatc
tctccttatttcgtgaccgataccgaaagcatgcaggtggaattcgaaaatccgcagatt
cttatccacgataaaaaaatatcggctatcaaagatcttcttcccatcctcgagaagagc
gttcaaaccggcaaaccgctgttgattatcgcagaagatatcgattcggaagcgcttacg
accctggttgtaaaccgtctgcgcggatcgttgaagattgcggctgtgaaagctcccgga
ttcggcgaccgccgtaaagaaatgctggaagatatcgccatcttgacgggcggtacggtg
atttcggaagaaaaaggcctgacgctcgaacatgcaacgctcgatatgttgggtagcgcc
gaaaaagtgactatcgacaaagataccacgacgatcgtaaacggggtgggcgataaagaa
accatccacaatcgtgtcgcacaaatccgcgctcaaatagaaaaaacaacgtccgattac
gaccgcgagaaattgcaggaacggttggcgaaactttcgggcggggtagccgtattgtat
gtaggcgctccttcggaagtggaaatgaaagaaaagaaagaccgtgtggacgatgcgctt
tccgcaacccgtgcagcggttgaagaaggaaccgttccgggcggcggtgtggcttacatc
cgcgccatcgaagcgttggaagggttgaaaggcgcgaacgaagacgaaaccaccggtatc
gaaatcgtcaaacgtgctatcgaagagccccttcgccagattgtcgccaacagtggcaaa
gaaggcgccgtgattgtgcagaaagttcgcgaaggaaaagcggactacggatacaatgcc
cgtaacgaccagttcgagaacctgtatgaaacgggtgtgatcgatcctgccaaagtgaca
cgcgttgcattggaaaatgcggcttccatcgccggcatgttcctgactaccgaatgtgtc
atcaccgacaagaaggaagacaatcctgctccgcaaatgcctatgggcggcggcggaatg
ggcggcatgatgtaa
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