KEGG   Limibacterium fermenti: ABNK31_03110
Entry
ABNK31_03110      CDS       T10860                                 
Name
(GenBank) ribonuclease Z
  KO
K00784  ribonuclease Z [EC:3.1.26.11]
Organism
lfg  Limibacterium fermenti
Brite
KEGG Orthology (KO) [BR:lfg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lfg03016]
    ABNK31_03110
Enzymes [BR:lfg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.11  tRNase Z
     ABNK31_03110
Transfer RNA biogenesis [BR:lfg03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    ABNK31_03110
 Prokaryotic type
    ABNK31_03110
SSDB
Motif
Pfam: Lactamase_B_2 Lactamase_B Lactamase_B_4 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: XGS83923
LinkDB
Position
complement(685209..686123)
AA seq 304 aa
MNRFDITILGCGSALPTTLHNPSSQLVNMNEKLFMIDCGEGTQLQMRKFKSRIGKLHSIF
ISHLHGDHIFGLPGLLSTLSLLGRTGDLTIYGHQDLQKFIDLLINYFGQHFPFRINLHPL
DPYNHQVIMENKSMRVHSFPLNHRIATCGFLFEEKEGQRHIIRERIDFYQIPLHNLSSIK
AGEDFVTADGTVIANRSLTYPAAPPRKYAYCSDTAYFPEIIPYIENADVLYHEATFAETE
LARAKQTFHSTAREAAEIARAANVKKLVIGHFSSRYNELDQLLKEAMVVFPDTELANEGK
VIEL
NT seq 915 nt   +upstreamnt  +downstreamnt
atgaatcggttcgatattaccatattagggtgcgggtcggcccttccgaccacgttgcac
aacccctcgtcacagttagtcaatatgaacgaaaagctgttcatgatcgattgcggcgaa
gggacgcagttgcaaatgcgcaaattcaaatcgcgcatcggcaaactgcatagcatcttt
atttcgcatctgcacggcgaccatattttcggccttccgggactgctgtccaccctcagt
ctgctcggcaggacgggcgatctgacgatttacgggcatcaagatctgcaaaagttcatc
gacctcctgataaattacttcggacagcatttccctttccggataaacctgcatccactc
gatccgtacaaccatcaggtgatcatggagaacaaatcgatgcgggtgcattcctttccg
ctgaatcatcgcatcgcgacctgcggattcctgtttgaagagaaagaaggccagaggcat
atcatccgggagaggatcgatttttaccaaattcctctccacaacctttcgtccataaaa
gccggagaagattttgtaacggccgacggaacggtcatcgcgaatcgctcgctcacctat
cccgccgcgccgccgcgaaagtatgcctattgttccgacacggcgtatttccccgaaata
atcccttatatcgagaacgcagacgtattgtatcatgaggccacttttgccgaaacagag
ctggcacgcgccaagcaaacattccactccacggcgcgcgaggcagccgaaatagcccgt
gcggcaaacgtaaagaaattagttatcggccatttctcttctcggtacaacgaattggac
caactgctgaaagaggcgatggtggtatttcccgacaccgaattggccaacgagggcaaa
gtcatagaactatag

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