Limibacterium fermenti: ABNK31_06330
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Entry
ABNK31_06330 CDS
T10860
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
lfg Limibacterium fermenti
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lfg02000
]
ABNK31_06330
01504 Antimicrobial resistance genes [BR:
lfg01504
]
ABNK31_06330
Transporters [BR:
lfg02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
ABNK31_06330
Antimicrobial resistance genes [BR:
lfg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
ABNK31_06330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
XGS84522
LinkDB
All DBs
Position
complement(1367525..1370641)
Genome browser
AA seq
1038 aa
AA seq
DB search
MRKNSGSIGSVMRHNQIMLLVIGILVVAGIYALAVMPKQEYPTFTIRQGVVVGVYPGANS
SVVEQQLTKPLEKYLLTFPEVNRKKTYSHTKDGIVYFYVELADNVKDKDIVWSKIKHSLS
VFKSQLPSGVLALIANDNFGDVAAILLAMESEDKTYREMDGYVDVLESRLRQVPSVANVN
RHGSQKEQISIYLDNDKLSAYGIGSKTLLLNLLTQGVTTTSGKIDNDQMHVPIHIADPLS
SEKEIEEQIIYSDPQGNVIRVKDIGRVVREYPDPESYITHNGKKCVLLSLEVQKSANIVS
FGKEVDKVLKNFEEELPESVQMHRIADQPEIVGNSISSFLQELLMAVIAVVLVIMLLLPL
RVAAVAATSIPITIFISIAILYAVGIPLNMVTLAALIVVLGMIVDNSVVIVDNYLDKLDH
GMSRWHAAIVSAKEYLKSIFSATLAISITFFPFLITMTGTTYDFLEYFPWTVTITLSISL
LVAIFVIPFIQYVFIRKGLLATKRERALQGKPERKTILDYLQGGYDKLLTGVFKHPKATI
GIAVISVGVGLYLFATLPQRMMPVVERNQFAVEMYLPQGSPLGATGAVSDSMEHLLRRDP
RVESVTAFVGASSPRFHLVYAPNMPSPAYAQFIVNTTSAKATEEILTEYTDQYAFYFPEA
YIRFKQLDFQAVAAPVEIRFSGENLQELKTQSEKMISYLNTLDECLRVRTDFDDMLPGAE
IVLDPVEAGRLGVNKALASLNLSSNYGGMSVSTMWEGDYPLSVVLKSDKDNEGFNSIENV
DVSGVIPGSIVPLRQVGTVKPDWTEGQIVRRNGMLTISVLADLKWNVNATEVIKKVRQHV
DSEVIPALPKGVNVEYGGETELNNEIIPDMINAMVIAVFIIFLILVFHFKRLKLALLVFS
SMALTVFGAAFGVWVMGIDFSVTAMLGLVSLAGIVVRNGIIMFDYTDELRQKYKLPVGKA
AFEAGKRRMRPIFLTSAAASMGVLPMVLSGDLMWAPLGTVIFFGTLISMIFVVTVLPVAY
WLLYKKSDRKVKVIADRI
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagaattcaggaagtatcggttcggttatgcgtcataaccaaataatgctgtta
gtgataggaattctggttgttgccggtatttatgcattggcagtgatgcccaaacaagaa
taccctacgtttaccatccggcaaggagtagtggtaggtgtttatcccggggcaaactcg
tcggttgtagaacaacaactgactaaaccgctcgaaaaatatttgcttacctttcccgaa
gtaaatcgtaaaaaaacgtattcgcatacgaaagacggcatcgtttacttttatgtggag
ctggcggataatgttaaggacaaagatatcgtatggtcgaagataaaacattctttgtcg
gtttttaaatcacaacttcccagtggcgtcctggccttgattgcgaatgataatttcggc
gacgtcgccgccatcctcctcgcaatggaatcggaagataagacttatcgcgaaatggac
ggctacgtggatgtccttgaaagccgcctccgccaggtaccttccgtagcgaatgtaaat
cggcacggctcgcaaaaggaacaaatatccatctatctggataatgataaattaagcgct
tacggcatcggctccaaaacactcctgctgaatttgcttacccaaggggttaccacaaca
agcggcaaaatagacaacgatcaaatgcacgtgccgatccatatcgccgatccgctttcc
tccgaaaaagagatagaggaacagatcatctattccgatccgcagggaaatgtcattcgt
gtcaaggatatcggacgggtagtacgcgagtatcccgatccggagagttatattactcac
aacgggaaaaagtgcgtactgttatcgttggaagtgcagaagagcgcgaatatcgtttct
ttcggtaaggaagtagataaggtcttgaaaaatttcgaggaagaattacccgaaagcgta
caaatgcaccgcattgccgaccaaccggaaatcgtaggcaactcaatcagctcgtttttg
caggaattactgatggctgttattgccgtggtattggtcatcatgctgttgctgcctttg
cgcgttgcggcagtcgcggccacgtccattccgattaccatatttatttcaatagcaata
ttatatgcagtgggtattccgttgaatatggttaccctggccgccctgatcgtggtactc
ggaatgattgtggacaattcggtggtaattgtcgataattatctggataagttggatcat
ggcatgtcgcgatggcatgcggcaatcgttagcgcgaaagaatatctgaagtctattttt
tcggcgaccctggcaatcagcatcacttttttcccttttcttatcacgatgacgggaacg
acttacgactttttggaatatttcccatggaccgtaaccattaccttatccatatcgtta
ttggttgccatattcgttattccgttcatacaatatgtatttataagaaagggattgttg
gccactaagcgggaacgggcgttgcaaggaaaaccggaaaggaaaacaatactggattat
ttgcaaggcggatatgataaattattgaccggagtgttcaaacatcccaaggcaaccatc
ggcatagcggttatttcggtgggagtaggattgtatttgttcgcaaccctcccgcaaaga
atgatgccggtagtagaacggaatcagtttgccgtagaaatgtaccttccgcaaggaagc
cccctcggcgccaccggtgcggtaagcgacagtatggaacatcttttgcgccgcgacccg
cgggtggaatccgtaacagcctttgtaggagcaagctcgcctcggttccatctggtgtat
gcgcctaacatgccatcgcccgcttatgcacagttcattgtcaatacgacatcggcaaaa
gctacggaagaaatactgacggaatataccgatcaatacgcgttttattttcccgaagcg
tacatccggtttaaacaattggattttcaagccgtggcggcgcctgtagagatccgtttt
tcgggagaaaacttacaggaattgaaaacccaatcggaaaagatgatttcctacctcaac
acattggatgaatgcctgcgcgtacggacggatttcgatgatatgcttccgggagccgag
attgtactggatccggttgaagcaggccgcttaggtgtcaataaagcattggcatcactg
aatttgtcgtccaattacggaggcatgtctgtcagtaccatgtgggagggcgactatccg
ctttcggtcgtattgaaatccgacaaagataacgaaggcttcaatagcattgagaatgtg
gatgtatcgggcgttataccgggctcgatcgtaccgttgcgccaggtcggaaccgtaaaa
cccgactggacggaagggcaaatcgtccgccgtaacggcatgctgaccattagcgtcctg
gccgatctgaaatggaatgtgaatgcaaccgaagtcatcaaaaaagtccgacagcatgtc
gattcggaagttattccggcattacccaaaggggtaaatgtcgagtacgggggcgaaaca
gaactgaacaacgagattatcccggatatgatcaacgcaatggtcattgccgtattcatc
atattcctgatactcgtattccatttcaagaggcttaaattggcgcttctggttttctca
tcgatggcgcttaccgttttcggagccgctttcggggtatgggtcatgggtatcgacttc
agcgtaacagccatgttgggattggtgagccttgcgggaatcgtggtacggaacggtatt
atcatgtttgattacaccgacgaactccggcaaaaatacaaattgcccgtaggaaaagcc
gcttttgaggcaggaaagcgacgtatgcgcccgatattcctcacctctgccgccgcctct
atgggcgtattgcctatggtattgagcggcgacctgatgtgggcgccgttgggaacggtt
atctttttcggcacattaatctccatgatatttgtcgtaacggtattacccgtagcctat
tggttattgtacaaaaaatcggatagaaaagttaaagtaatagcagacagaatatga
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