Limibacterium fermenti: ABNK31_08040
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Entry
ABNK31_08040 CDS
T10860
Symbol
topB
Name
(GenBank) DNA topoisomerase III
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lfg Limibacterium fermenti
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfg03032
]
ABNK31_08040 (topB)
Enzymes [BR:
lfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ABNK31_08040 (topB)
DNA replication proteins [BR:
lfg03032
]
Prokaryotic type
DNA Topoisomerases
ABNK31_08040 (topB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_Crpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
XGS84844
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All DBs
Position
1773223..1775334
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AA seq
703 aa
AA seq
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MQVCIAEKPSVAKSIAAILGATHKKDGYMEGNGWAVTWAFGHLVGLAMPEAYGITSFQRE
NLPILPQEFTLVPRQIKEGKEYKNDPGVMKQLNVIKELFSKADGIVVCTDAGREGELIHR
YIYSYLQCNKPCQRLWISSLTDKAIKEGFQNLKPGSDYDNLYLSAKARSQADYIVGINAS
QALSIAAGRGVWSLGRVQTPTLAMICSRYLENKDFKPQTYFRLKLHTEKDATLFAVLSAD
KYDSRPAADEALQQVKATGTVRVAGVEKKEVKQEPPLLYDLTTLQKEANSKHGFSAEKTL
NIAQTLYEGKKISYPRTGSRYISSDVLEEIPHLIATLKNHPRFGNYASGMESIALNTRCV
NDKKVTDHHALIITGDPADGLTGDERTIYNMVAGRMLEAFSNHCIKENTTVSLDAGGVHF
TAKGSVTLLPGWRSVFNATDEETQDEDIITLPALAGGDILSVPDTEVLEKQTKPRPLHTE
ASLLSAMESAGKKCENEEEREAMKDAGIGTPATRSAIIETLFAREYIVREKKSLVPTNKG
LVVYLAVKDKKIADVAMTGAWELALNKIGSGEMDAVTFHRSIEVYASQITAELLEITFEQ
NDNRPGCPCPKCRKGQVVFYPKVAKCNNGHCRLTVFRGIAKKELTDTQLTSLLTNGATPM
IKGFVSSKTGNTFEAAVVFDAEYKTVFKFPENKKGNWKKGKPK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtttgtatagcagaaaaaccgagtgtggctaaaagtatagccgccatactcggc
gcaacccataaaaaagacggctatatggaaggtaacggctgggctgttacctgggcattc
ggccacctggtcgggctggcaatgcccgaagcctacgggattacaagttttcagcgcgaa
aacctgcccatactcccgcaggagtttacgctggttccccgccagataaaagaggggaaa
gagtataagaatgatcccggcgtgatgaagcagcttaacgtcatcaaagagttgttctcc
aaagccgacggcattgtcgtttgcaccgacgcgggacgggagggcgaattaattcaccgc
tatatatactcttacctgcaatgtaataagccctgccaaaggttgtggatcagctcgctg
accgataaagccatcaaagaaggcttccaaaacctcaaacccggtagcgattacgacaac
ctctatttgtctgccaaagcccgcagtcaggctgattacatcgtaggaattaatgcaagc
caggcgttgagcattgccgcaggacgcggcgtatggtctttagggcgcgtccagaccccg
acgctggcgatgatatgcagccgctatctggagaacaaggatttcaaaccgcaaacgtac
ttccgcctgaaactgcatacggaaaaagacgcaacattgtttgccgttttatcggcggac
aagtacgacagccgtcccgcagccgatgaagcgctgcaacaggtgaaagcaaccggaact
gtccgtgttgcgggtgtcgaaaagaaagaggtaaaacaggaaccgcctttgctttacgac
ctcaccaccttgcagaaagaggccaacagcaagcacggcttttcggcggaaaagacattg
aacatcgcccagacgttatatgagggcaagaaaatatcctatccccgcaccggctcccgc
tatatctcctccgacgtgctggaggaaataccgcacctgatcgccaccttgaaaaaccat
ccccgtttcgggaattatgcgtcgggaatggaaagcatagccttaaatacccgctgcgtg
aacgacaagaaagtaaccgaccaccatgccctgatcatcaccggagatcccgcggacgga
ttgaccggggatgaacgtaccatctacaatatggtggcggggcgtatgctggaggctttt
tccaatcattgcatcaaagagaacaccaccgtttcgctggacgcgggcggcgtacacttt
actgcaaagggcagcgtcacgctacttcccggctggcggtctgtgttcaacgccaccgat
gaagaaacgcaggacgaggatataatcaccctgcccgcgctcgccggaggcgatatactt
tccgtcccggacacggaagtattggaaaagcaaaccaagccccgcccgttacataccgaa
gcctcgttgctttcggcaatggagagcgccggtaagaaatgcgaaaatgaagaagaacgt
gaggcgatgaaggatgccggtatcggtacgcctgccacccgctccgccatcattgaaacc
ctctttgcaagggaatatattgtacgcgaaaagaagtcgctcgttcccaccaacaaggga
ttagtcgtttatctggctgtcaaagacaaaaagattgccgatgtcgccatgaccggagcc
tgggagcttgccctgaacaagatcggctccggagagatggatgctgttacttttcatcgt
tcgatagaagtatatgcttcacagattaccgctgaactgttggaaatcacttttgaacag
aacgacaatcgtcccggctgtccctgccccaaatgcaggaaagggcaggtcgtgttttac
ccgaaggttgccaaatgcaataacgggcattgcaggctgacggtattccgcggcattgcc
aaaaaagagctgaccgatacgcagcttacctcgcttctgacaaatggtgcaacgcccatg
attaaaggcttcgtaagcagcaagacgggtaatacgtttgaggctgccgttgtgttcgat
gcggagtataagactgtgttcaaattccccgaaaacaaaaagggcaattggaaaaaaggt
aagccgaagtaa
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