Limibacterium fermenti: ABNK31_08320
Help
Entry
ABNK31_08320 CDS
T10860
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lfg Limibacterium fermenti
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfg03016
]
ABNK31_08320 (truB)
Enzymes [BR:
lfg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABNK31_08320 (truB)
Transfer RNA biogenesis [BR:
lfg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABNK31_08320 (truB)
Prokaryotic type
ABNK31_08320 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XGS84894
LinkDB
All DBs
Position
1840616..1841314
Genome browser
AA seq
232 aa
AA seq
DB search
MDFIEGEILHINKPLHWTSFRVVRVVRAKICSRLKIKKLKVGHTGTLDPLATGVMTICTG
RKTKEIDRLQALTKEYVADIRLGATTPSFDLETEVDGTYPTGHITEEAVRECLRRFEGEI
QQVPPAFSAVKVEGRRAYTFARNNETIELKPKLLVIESIELLSVDLPTIRVRVVCSKGTY
IRALARDIGEALHTGAHLTALTRTRIGEVTLDQCLGMESLELFFDQHIAGQP
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggattttatagaaggagagatcctacatattaataaaccgcttcattggacatcgttc
cgtgtggtgcgtgtggttcgggcaaagatttgttcgaggcttaagatcaaaaagttgaaa
gtcggccataccggaacgctcgatccgttggcaaccggcgttatgacgatttgcaccgga
aggaagacgaaagagatagaccgcttgcaagcgttgacgaaagaatatgtggccgatata
cggctgggggctacgacgccctcgttcgatttggaaacggaagtcgacggtacgtatccc
accgggcatatcaccgaagaggccgtgcgcgaatgcctgcgtcgcttcgaaggcgaaata
caacaggtgccgcccgctttttcggcggttaaagtcgaaggaagacgcgcgtacactttc
gcccgcaataacgagacgattgaactaaaacccaaattgttggttatagagagtattgaa
ttgctatctgttgatttaccgactatccgggtgcgtgtcgtgtgcagtaaagggacttac
atcagggcgttggccagggatattggagaggctttgcataccggagcccatttaaccgcg
ttgacgcggacccgaataggcgaggtgacattagatcaatgtttgggtatggaatcgtta
gaactgtttttcgatcaacatatcgccggacagccataa
DBGET
integrated database retrieval system
