Limibacterium fermenti: ABNK31_08545
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Entry
ABNK31_08545 CDS
T10860
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
lfg Limibacterium fermenti
Pathway
lfg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABNK31_08545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfg03021
]
ABNK31_08545
Transcription machinery [BR:
lfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABNK31_08545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
Sigma70_ECF
HTH_40
HTH_5
PF0610-like_N
Xre-like-HTH
HTH_17
AKAP7_RIRII_bdg
SAM_SMF
HTH_28
HTH_11
Tom37
HTH_23
Motif
Other DBs
NCBI-ProteinID:
XGS84939
UniProt:
A0ACH2UHR2
LinkDB
All DBs
Position
complement(1896401..1897003)
Genome browser
AA seq
200 aa
AA seq
DB search
MQQPAPVLKEWFHRISEDDPAAFDELFRAKYTGLVRFAGLFLTDSGKAEEVVSDVFVEIW
LHRQSLSSVDHPVTYLYVSVKNRCLNAKRTATRMVSIEEETAVSQSAATETPLSRMEDNE
LSANLRAIVEQLPDQQKTVFKMIREQELTAKQTAQILHLSQRTVETHLYKAIQQLEAEIT
AYLGYSPRKRQMKKMLSVLV
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacccgctcccgtcctaaaagaatggtttcaccggatatccgaagatgatccg
gcagctttcgatgaattgtttcgcgcgaaatataccggcttggtacgttttgccggactc
tttttaactgatagcggcaaggcggaagaagtcgtttcggatgtatttgtggagatctgg
ttgcatcggcaatccttatcttctgtcgatcatccggtcacctacttatatgtatccgtg
aagaaccgatgcttaaacgccaagcgtaccgctacccgcatggtctctatcgaagaggaa
accgccgtatcgcaatcggcagccacagaaacgccgttgagccgcatggaagataatgaa
ttatcagcgaaccttcgcgctattgtagagcagttacccgaccaacaaaagacagtattt
aaaatgattcgcgaacaggaacttaccgccaaacaaacggcgcaaatattgcatctctcg
caacgtaccgtagaaacccacctctacaaagccattcaacagctcgaagcggaaataacc
gcttatttaggatattcaccccgcaaaaggcaaatgaaaaaaatgctctcagtattagtc
taa
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