Limibacterium fermenti: ABNK31_08725
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Entry
ABNK31_08725 CDS
T10860
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lfg Limibacterium fermenti
Pathway
lfg03410
Base excision repair
Brite
Enzymes [BR:
lfg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ABNK31_08725 (ung)
DNA repair and recombination proteins [BR:
lfg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ABNK31_08725 (ung)
Prokaryotic type
ABNK31_08725 (ung)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
XGS84972
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All DBs
Position
1950175..1950837
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AA seq
220 aa
AA seq
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MDVKIEESWKERLQDEFEKPYFKQLTDFVREEYRARTIYPPAKLIFNAFDCCPFDKVKVV
IVGQDPYHEPGQAHGLCFSVNEGIQIPPSLVNIYKEIQDDLGVPVPRSGNLERWCRQGVL
LLNATLTVQAHRAGSHQHKGWEEFTDAAIRHLANEREHVVFLLWGSYAQRKGENIDTNRH
LVLKSPHPSPLSAHRGFFGNKHFSKANAYLIANGEEPIEW
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atggatgttaaaatagaagaaagttggaaagagcgcttgcaagatgaatttgaaaagcct
tattttaaacagctgaccgattttgtgcgcgaagaatatcgtgcacgtactatttatcca
ccggcaaaattgatctttaacgcgttcgattgctgccctttcgataaagtgaaagtcgtt
atcgtagggcaagatccgtatcacgaacccggccaggcgcatggattatgcttttcggta
aatgagggaatacagattcctccttcgcttgtgaatatttataaggaaatacaggacgat
ttaggagtgccggttccccgttcgggtaatttagaacgatggtgccggcagggagttctt
cttctgaatgcgacccttaccgttcaggcccaccgcgccggctctcatcagcataaagga
tgggaagaatttacagatgcggctatccgtcatttggcgaacgaacgggaacatgtggtc
tttcttctttggggatcgtatgcacaacgaaaaggggaaaatatcgatacgaatagacat
cttgtcctgaagtccccgcatccttcgcctttatcggcacaccggggattctttggaaat
aagcattttagtaaagccaatgcctatttgattgccaacggcgaagaacccattgaatgg
taa
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