Limibacterium fermenti: ABNK31_10145
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Entry
ABNK31_10145 CDS
T10860
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
lfg Limibacterium fermenti
Pathway
lfg03030
DNA replication
lfg03430
Mismatch repair
lfg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABNK31_10145
03430 Mismatch repair
ABNK31_10145
03440 Homologous recombination
ABNK31_10145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfg03032
]
ABNK31_10145
03400 DNA repair and recombination proteins [BR:
lfg03400
]
ABNK31_10145
Enzymes [BR:
lfg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABNK31_10145
DNA replication proteins [BR:
lfg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABNK31_10145
DNA repair and recombination proteins [BR:
lfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABNK31_10145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
Motif
Other DBs
NCBI-ProteinID:
XGS81926
LinkDB
All DBs
Position
complement(2288333..2289451)
Genome browser
AA seq
372 aa
AA seq
DB search
MYFRDIIGLSDVKKHLIDSVRQGLVPHARLFYGPEGVGKLPLAIAYARYLNCEHRGEEDA
CGKCPSCQKFDKLAHPDLHFVFPVIKSKVCDEYLPQWRQFLLQNTYFNLNDWLRFIDAQN
AQGVIYAKESDEIIRKLNLKVYEATYKVMIVWLPEKMHEACANKLLKMIEEPPANTVFLL
VSDDPENVLQTIRSRCQPLPVRAIGYDDMVGAVRHTLALDPDTAKAVAHIANGSFSRAIE
IVQSSDERRHFFDLFVKMMRSSVSRNIKLIKETAGELASAGRETQKSFLEYSLSMFREYF
ISNLHQPEMVYLDYEEQAFGQRFAPFINEKNIEAFYDEFSLAYRQIEQNGNAKIIFLDLC
LKVTVLLKKDEL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
ttgtatttcagggatatcatagggttaagcgacgttaagaagcacctgatcgattcggtt
cgtcaggggttggttccgcatgcgcggctgttttacggcccggaaggggtggggaagcta
ccgcttgccatcgcttacgcccgatacctgaactgcgaacatcgcggtgaagaggatgct
tgcggcaaatgcccgtcgtgtcagaaattcgacaagctggctcatcctgacctgcatttt
gtttttccggtgatcaaatcgaaagtgtgtgacgaatatctgccgcagtggcgtcagttt
ttgttgcaaaacacctatttcaatctgaatgactggcttcgctttatcgatgcgcagaat
gcgcaaggggtgatttatgccaaagagagcgacgagatcattcgtaagctcaacctgaaa
gtatatgaagctacctacaaggtgatgattgtgtggctgccggaaaaaatgcacgaggct
tgtgcgaacaaactgctcaaaatgattgaagagccgccggccaatacggtgttccttttg
gtatcggacgatccggagaatgtcttgcagaccatccggtcgcgctgccaaccgttgcct
gtccgcgccattgggtatgacgatatggtgggcgccgtacggcatacgctcgctttggat
ccggatacggccaaggcggtcgcccatatagccaacggtagtttttcgcgcgccatcgaa
atcgttcaatcgtcggacgagcggcggcattttttcgatcttttcgttaaaatgatgcgt
tcgtcggtgtcgagaaacatcaaactgattaaggaaactgccggggaactggcctctgcc
ggacgtgaaacgcaaaagagtttcctcgaatacagcctgtcgatgttccgcgagtatttt
atcagtaacctgcaccagccggagatggtgtatctcgattacgaagagcaagcgttcggc
caacgtttcgccccttttatcaacgaaaaaaatatcgaagcgttttacgatgaattttca
ttggcttaccggcaaattgaacaaaacggcaatgctaaaattatttttctcgacctttgc
ttgaaagtaacggtgctgctaaagaaggatgagttatga
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