KEGG   Limibacterium fermenti: ABNK31_10770
Entry
ABNK31_10770      CDS       T10860                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
lfg  Limibacterium fermenti
Pathway
lfg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lfg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ABNK31_10770 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lfg03019]
    ABNK31_10770 (rny)
Messenger RNA biogenesis [BR:lfg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     ABNK31_10770 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B KH-I_KHDC4-BBP DsrD V_ATPase_I
Other DBs
NCBI-ProteinID: XGS85110
LinkDB
Position
2419576..2421111
AA seq 511 aa
MNMEIVIGIISLLIGGGIAWYVSGKMANSRAQKMLSDAEKDGDVIKKKKLLEAKEEILAM
KSETEKQIANRTAKIQNVETRLKQRELSLNQKQEELNKKYTELEEIKVNLSSQQEILEKN
NAEAERLHRQSVEKLETISGLSADDAKERLVESLKEEAKTEAQSYINDIMEEARMTANKE
AKRIVVQSIQRVATETSIENSITVFHIDSDEVKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSGFDPVRREIARLSLHQLVTDGRIHPARIEEVVAKVKKQIEEEIVEIGKRTVID
LGVHGLHPELIRLVGKMKYRSSYGQNLLQHSRETANLCAIMAAELGLNPKKAKRAGLLHD
IGKVPDDEPELPHALLGMKLAEKYKEKPDICNAIGAHHDEVEMTTLLSPIVQVCDAISGA
RPGARREIVEAYIKRLNDLEKLALSYPGVVKTYAIQAGRELRVIVGADKIDDQDTEKLSS
EIARKIQTEMTYPGQVKITVIRETRAVSFAK
NT seq 1536 nt   +upstreamnt  +downstreamnt
atcaatatggaaatagtaataggtattataagcttactcataggcggcggaattgcttgg
tatgtgagcgggaaaatggctaattcgcgcgcccaaaaaatgttgagtgatgcggaaaaa
gatggggacgtcattaaaaagaagaaacttctggaagcgaaggaggaaattctcgccatg
aaaagcgagactgaaaagcaaatagccaaccggaccgctaaaatacaaaatgtagaaacc
cgtcttaaacaacgcgaactatctctcaatcaaaagcaggaagagctgaataaaaagtat
accgaactcgaggagataaaagtcaatttaagttcccaacaagagatattggaaaagaat
aatgcggaagccgaacgccttcatcgtcaatcagtggaaaaactggaaaccatttccggc
ctatcggctgatgatgcaaaagaacggctggtagaatcgttgaaagaagaagcgaaaacc
gaggctcaatcgtatattaacgacatcatggaggaagcccggatgacggctaataaagaa
gccaagcgcatcgttgtacaaagcatacagcgtgttgcgaccgaaacctctatcgaaaac
tccatcacggtattccacatcgattccgacgaagtgaaggggcgcattatcggccgcgaa
ggacgcaatatccgggcattggaagccgctacgggagtcgagattgtcgttgacgacacc
cctgaagcgatcgtcctttcaggttttgacccggtgcgccgcgaaatcgcccggttgtcg
ctgcatcaactcgtaaccgacgggcgtatccatccggcccgaatcgaagaagtggtggcc
aaagtgaaaaaacaaatcgaagaagaaatcgtcgaaatcggcaaacgcaccgtcatcgac
ttaggcgtccatggcttgcatcccgagttgattcggctcgtcggaaaaatgaaataccgt
tcttcttacggacaaaacttattgcagcactcccgcgaaacggctaatctatgcgccatc
atggccgccgaattgggactgaatcccaaaaaagccaaacgtgccggattgctccacgac
atcgggaaagtgcccgatgatgagcccgaattgccgcatgcgctcctaggtatgaagtta
gcggaaaaatataaagagaagccggacatttgcaatgcgatcggcgcgcatcacgatgaa
gtggaaatgacgacgctcctctcccccatcgttcaggtttgcgatgccatttcaggagct
cgaccgggtgctcgtcgcgaaatcgtcgaagcctatatcaagcgcttgaacgatttggaa
aagctcgctctatcctaccccggcgttgtcaaaacgtatgccatccaggcaggacgtgag
ttgcgggtcattgtcggcgccgacaaaatagacgatcaggacacggaaaaactatcctcc
gagattgcccgtaaaatacaaacggaaatgacttatcccggccaggtaaagattactgtg
atccgggaaacccgagccgttagttttgcgaagtaa

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