KEGG   Limibacterium fermenti: ABNK31_11005
Entry
ABNK31_11005      CDS       T10860                                 
Name
(GenBank) HD domain-containing protein
  KO
K00974  tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
Organism
lfg  Limibacterium fermenti
Pathway
lfg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lfg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ABNK31_11005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lfg03016]
    ABNK31_11005
Enzymes [BR:lfg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.72  CCA tRNA nucleotidyltransferase
     ABNK31_11005
Transfer RNA biogenesis [BR:lfg03016]
 Eukaryotic type
  3'processing and CCA adding factors
   CCA adding factors
    ABNK31_11005
 Prokaryotic type
    ABNK31_11005
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2 MAP65_ASE1
Other DBs
NCBI-ProteinID: XGS82090
LinkDB
Position
complement(2492304..2493743)
AA seq 479 aa
MDVSSEEIKAYLSNDIFRLISLAADEMQLECYVIGGYVRDFFLCRPSDDIDIVTVGKGIE
LAESVARKLGKRTRINVYKNFGTAQIKHKEYEIEFVGARKESYSRDSRKPVVEDGTLEDD
QKRRDFTINALAFCLNADRFGELVDPFNGLQDLSDLLIRTPLDPDITFSDDPLRMMRAVR
FASQLGFDIYAETFDAIERNAGRIEIISKERIADELNKIVLSPKPSVGFILLEKTGLLDR
IFPELMALKGAETRDGIGHKDNFYHTLMVLDNIARQTDDLWLRWAALLHDIAKPQTKRWD
PKLGWTFHNHNYVGEKMVPKIFRRMKLPQNEKMKFVQKMVSLHMRPMQLVEEEVTDSAVR
RLLFDAGDDIDDLMTLCEADITSKNPVKVRRFLDNFKIVRRKLKEIEEKDRVRNFQPPID
GNEIMTVFGLGPGREVGILKSTIKEAILDGIIPNEYDAAYSFMLEKASEMGLYPTKKND
NT seq 1440 nt   +upstreamnt  +downstreamnt
atggatgtctcttcagaggagataaaggcttatttatcaaacgatattttccggctcata
tcgctagcggcggatgaaatgcagttggaatgctatgtcattggagggtacgtacgcgat
tttttcttatgtcgtccgtccgatgatatcgatattgtgacggtcgggaaaggcatcgaa
cttgctgaatcggttgcccggaagttggggaaacgtacccggataaatgtctataagaat
ttcggcaccgcgcaaatcaagcataaagagtatgaaatagaattcgtcggagcacggaaa
gaatcttatagccgggattcgcgcaagcccgtcgttgaagacggaacattggaggatgac
caaaaaaggcgcgattttacgattaatgccttggctttttgtttgaacgccgatcgcttt
ggcgaattggtggatccgtttaacgggttgcaggatttgagcgatttgcttatccgtact
ccgctcgatccggatattacttttagcgacgacccgctgcggatgatgcgcgccgtgcgt
tttgcttcgcaactgggttttgatatctatgccgaaacgttcgatgccatcgagcgtaat
gccggacggatcgaaattatttcgaaggaacgtattgccgatgagttgaataaaattgtg
ctttcgccgaagccgtccgtcggatttatcctattggaaaaaaccggcttgctcgatcgt
attttccctgaattgatggctttgaaaggcgccgaaacccgagacggaatagggcataag
gataatttttaccatacattgatggtgttggacaatattgcccgtcaaaccgatgattta
tggttgcgttgggctgccttgctccatgatattgccaaaccccagacaaaacgttgggat
ccgaagttgggctggactttccataatcataattatgtcggcgaaaagatggttcccaag
atttttcgccggatgaaacttccgcaaaatgaaaagatgaaatttgtgcaaaagatggtt
tctctgcacatgcgccccatgcagttggtggaagaggaggtgaccgattcggccgtccgc
cgtttgctttttgacgccggagatgatattgatgacctgatgacgttgtgcgaagcggat
attacatcgaaaaatcccgtgaaagtacgccgctttctggataactttaaaattgtccgc
cgtaaattgaaagaaatcgaagagaaagatcgcgtgcgtaatttccagccgcctatcgac
gggaatgaaattatgactgttttcgggttaggcccgggacgagaagtcggaattttgaaa
tcgaccatcaaggaagcgattctcgatggaatcattcccaacgagtatgatgcggcttat
agctttatgctggagaaagcgtctgagatggggctatatcccacgaaaaaaaacgattaa

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