Limibacterium fermenti: ABNK31_11270
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Entry
ABNK31_11270 CDS
T10860
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
lfg Limibacterium fermenti
Pathway
lfg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABNK31_11270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfg03021
]
ABNK31_11270
Transcription machinery [BR:
lfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABNK31_11270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
GerE
Sigma70_r4
HTH_38
HTH_30
DUF8604
Sigma70_ECF
DUF8427
HTH_40
Motif
Other DBs
NCBI-ProteinID:
XGS82139
UniProt:
A0ACH2UCC4
LinkDB
All DBs
Position
2539986..2540549
Genome browser
AA seq
187 aa
AA seq
DB search
MEKMFHPDKFAEIYDAYYKKCFLFTKSYVHEKQAAEDIASDSFIHLYEALQKGEEIKNIP
AYLLTLVKNKAVDYLRQKTIRMRTHETFSNIDAEELEYRISTLEGCNPELIYSKEIQQIV
DATLKQLSPKTREIFRMSRYENYSNKQIATELNIHIKTVEYHITQSLQLLRRNLKDYLPL
FYFFFYF
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaatgtttcacccggataaatttgcagagatatacgatgcctattataaaaaa
tgttttttatttacaaaatcctatgtacatgaaaaacaggctgcggaagatattgcatcc
gactcgttcatccatttatacgaagctctgcaaaaaggagaagaaataaaaaacattccg
gcctacctattaaccttagtaaagaataaggccgtcgattatctgcgtcaaaagacgata
cggatgaggacacacgaaacattctccaacatcgatgccgaagaactcgagtaccgtata
tccacgttggaaggatgcaacccggaacttatctattctaaagaaattcaacaaattgtg
gatgcaaccttgaagcaattatctcctaaaacccgtgaaatttttagaatgagccgttac
gagaactattcgaataaacagatcgctacggaattaaacatccatataaaaaccgtagaa
taccacattacgcaatccttacaactgctgcggcgaaacttgaaagactatttgccgctg
ttttattttttcttttatttttaa
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