Limibacterium fermenti: ABNK31_12305
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Entry
ABNK31_12305 CDS
T10860
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
lfg Limibacterium fermenti
Pathway
lfg00470
D-Amino acid metabolism
lfg00550
Peptidoglycan biosynthesis
lfg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ABNK31_12305 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ABNK31_12305 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lfg01011
]
ABNK31_12305 (murD)
Enzymes [BR:
lfg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
ABNK31_12305 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
lfg01011
]
Precursor biosynthesis
Amino acid ligase
ABNK31_12305 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
DUF7000
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
XGS82330
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Position
complement(2829245..2830588)
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AA seq
447 aa
AA seq
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MERKLLIVVLGGGESGVGSAILAQAKGYEVFLSDSGSLKEEYRKTLTDYGIPFEENGHTE
QTILAAHEIIKSPGIPNTTAIMQKIIAKGIPVISEIEFGGRFTNAKMICITGSNGKTTTT
SLVYHILKSAGFNVGLGGNIGKSFARQVAEDHFDYYVLELSSFQLEGVFDFKADIAVLLN
ITPDHLDRYDHDMQLYVDAKMRIIRNQKVNDALIYWVDDPVVTKEIRKLKPLSSLLPFSA
EKRDDTVAYADNNEVVIHVNNNTFNMDLELLALEGTHNLYNSLASGIVAKLLDIQDETLR
QSLADFKGVPHRLEKVAVVRGVQYINDSKATNVNSCWYALQSVRTKIVLILGGKDKGNDY
SEIEDLVLRKVRTLIFLGKDNSKLHAFFDGKVPDIKDASSMQEAVSLAYGSAEKGDTVLL
SPCCASFDLFESYEDRGDQFKEWVRKL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggaacgtaaattattaatcgtggtgctcggagggggagaaagcggcgtcggatcggct
attctcgcgcaggcaaaaggatatgaagtctttttatcggacagcggctctttaaaggag
gaatatcgcaagacgttgacagactatggcattccctttgaagaaaacgggcataccgaa
cagacgattttagcggcgcatgagatcattaaaagtcccggcattcccaatacgactgct
atcatgcagaagattattgcaaagggaataccggtcatttccgaaatcgaattcggcgga
cggtttacgaatgcaaaaatgatttgcattaccggcagtaacggtaaaaccaccacgacc
agcttggtgtaccatattttgaagtctgcgggctttaatgtgggactgggaggaaacatc
ggaaagagtttcgcccgtcaggtggcggaagatcatttcgattactatgttctggagtta
agcagcttccaattggagggggtattcgattttaaagccgatattgcggtgttgctcaat
attacgccggatcatctcgaccggtatgatcatgatatgcaactgtatgtcgatgctaaa
atgagaatcattcgaaatcaaaaggtgaatgatgctttgatctattgggtcgatgatccc
gtggtgaccaaagaaataaggaaactgaaaccgctgtcgtcactcctccctttttcggcg
gagaagcgcgacgacactgttgcttatgccgacaataacgaagtggtgatacatgtaaat
aataatacattcaatatggacttggaattattggctttggagggtacgcacaacttgtat
aattcgttggcttcgggaatcgtcgccaaactgctcgatattcaggacgagacgttgcgt
caatcacttgccgactttaagggagtgccccatcgcctggaaaaggtagctgtcgttcgt
ggcgtacaatacatcaacgactcgaaagcgacgaatgtcaactcgtgctggtacgctttg
cagagtgtccgtaccaaaatcgtgctgatcctcggaggaaaggataaaggaaacgattat
tctgaaattgaagatttagtattgaggaaggtgcgcacattgatattcctcggaaaagac
aatagcaagttgcatgcatttttcgacggaaaagtcccggatataaaagacgcttcttcg
atgcaggaagctgtttcattagcgtatggttctgccgaaaagggcgataccgtgttgtta
tcgccttgttgtgccagtttcgatctctttgaaagttacgaagaccggggtgatcagttt
aaagagtgggtgagaaagctgtga
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