Limibacterium fermenti: ABNK31_13345
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Entry
ABNK31_13345 CDS
T10860
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
lfg Limibacterium fermenti
Pathway
lfg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABNK31_13345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfg03021
]
ABNK31_13345
Transcription machinery [BR:
lfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABNK31_13345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
GerE
HTH_10
HTH_24
Sigma70_ECF
HTH_40
HTH_23
HTH_5
IreB
DUF2774
PF0610-like_N
KORA
HTH_11
GP68
Motif
Other DBs
NCBI-ProteinID:
XGS82523
UniProt:
A0ACH2UAW1
LinkDB
All DBs
Position
complement(3076236..3076793)
Genome browser
AA seq
185 aa
AA seq
DB search
MNNEYFEIAYKKYFKVLFYYALRIVSKEAAAEDIVQDVFLEFWKQRRSIDLMASPKPYLY
TLTYHKSIDYLRSSETNNISFSHFDTHLDEVFFNIFTSEENLDVRDMEEVIETAIASLPP
KCREVFLLSREKGMKNAQIAEILGITPKAVEKHITKALKDIKSALEEKGYFPLWIILLYF
LYRGW
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgaatattttgaaatagcatataagaaatatttcaaggtgcttttttattat
gcccttcggatagtatcaaaagaagcagcagcggaagatattgttcaagatgtatttctg
gaattttggaagcaacgaaggtctattgatctgatggcttctccaaagccatatctctat
acgcttacctatcataaaagtattgattatttaagatcctcggagacgaataatatctct
ttctcccattttgatactcacttagacgaagtcttttttaatatctttacctctgaggag
aatttagatgttcgggatatggaagaggtcattgagactgcgatagcatcgctccctccg
aaatgtagggaagtattcctattgagccgtgaaaagggaatgaaaaatgctcaaattgcc
gagatacttggtatcacacccaaggcggttgaaaaacatataacgaaggccctcaaagat
attaaatccgctttagaagaaaaaggctatttccctctttggattattcttttatatttc
ttatacagaggatggtag
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integrated database retrieval system
