Limibacterium fermenti: ABNK31_13795
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Entry
ABNK31_13795 CDS
T10860
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
lfg Limibacterium fermenti
Pathway
lfg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABNK31_13795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfg03021
]
ABNK31_13795
Transcription machinery [BR:
lfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ABNK31_13795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
HTH_23
Sigma70_ECF
HTH_40
HTH_28
HTH_24
DUF7423
PCI
DUF2774
HTH_10
P53_TAD
TnsD
HTH_36
DUF6362
Motif
Other DBs
NCBI-ProteinID:
XGS82611
UniProt:
A0ACH2UC84
LinkDB
All DBs
Position
3176360..3176866
Genome browser
AA seq
168 aa
AA seq
DB search
MGLSKKEFSAYFHAYYRPLCLHALHYLGNTDESEDIVQETFANLWSKQPSGGIQSVKAYL
FGAVRNNCLAKIRDAKTTVPLEPGYIDDSLTIEEEQERADMESRIWKMIDELPERRREIF
LLAKRDGLRYKEIADLTGLSVKTVESHVARAMQQLRQKDRGAYLFFFA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggggctttctaaaaaagagttttcagcgtattttcatgcatattaccgcccgctgtgc
cttcacgcgttacattatctgggaaatacagacgaatccgaagatattgtacaggaaact
tttgccaatttatggagcaaacaaccttccggcggaatacaatcggtgaaggcctacttg
ttcggtgcggtgcgcaacaattgtctcgctaaaatacgcgatgcaaagacgacggttccc
ctcgagcccggatatatcgacgatagcttaacgattgaagaggagcaggaacgcgccgac
atggaaagccggatatggaagatgatcgacgaattgccggaacgccggcgggagatattc
ttgctggccaaacgcgacgggctgcgctataaagaaatcgccgatttgaccggactgagt
gtgaaaaccgtagaaagccacgtggcacgcgccatgcagcagctccgtcaaaaagaccga
ggcgcctatctctttttctttgcataa
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integrated database retrieval system
