Limibacterium fermenti: ABNK31_14835
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Entry
ABNK31_14835 CDS
T10860
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lfg Limibacterium fermenti
Pathway
lfg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABNK31_14835 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfg03400
]
ABNK31_14835 (priA)
Enzymes [BR:
lfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABNK31_14835 (priA)
DNA repair and recombination proteins [BR:
lfg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABNK31_14835 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PriA_C
Cas3-like_C_2
Zn_ribbon_6
nSTAND3
DUF3340
DUF190
AAA_19
Zn_Ribbon_TF
Motif
Other DBs
NCBI-ProteinID:
XGS82810
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All DBs
Position
3426399..3428843
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AA seq
814 aa
AA seq
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MFADVVLPLPLSETFTYAVPASMQSALAIGCRVIVPFGKRKYYTAIVLKIHHDAPQSGVS
LKDIHSLIDSVPLVNENQLKLWEWVSFYYLSPLGDVYKAAFPSKLRMESETMVSALVGHA
TDEKGLRPKEKQIIDLLNEHDLPVKISEIAVRLKIGNVLPTVYSLAEKGLVVIHESIQSK
FAPKTETHIFLPKKLSPQSASHAIGKAKKQQLLYEQITGIFAASEADSFSRKEIMALTGA
SASVLNGLLQKNVLRQATVEIGRLGDGAARVTRAPHTLNEYQQQAFTEIIDCFNDRKPCL
LHGVTSSGKTEIYIHLIKRLLEEGKQTLYLVPEIALTTQLTHRLQAVFGDKLAIYHSKIN
DQERAEIWKKMLSDHPYDIVIGVRSSLFLPFKRLGLIIVDEEHESSYKQTEPAPRYQARD
TAVMLAHLTKAPILLGTATPSMESYFNAQTGKYGLVTLANRYEDISLPEIILENTKELRR
KKKMKSLLSPALISYMDNALQEGGQVILFRNRRGFAPMVECQLCGWTPKCRRCDVSLTYH
KSRNELVCHYCGTTYKMVTECPECHQPSIEPVGMGTEQVEEEVARLFPEVSIARMDADTT
RGKNAYENILSDFQQKKTRILIGTQMLSKGLDFDDVSVVGIISADSLLNYPDFRSHERGF
QLMMQASGRAGRKNKRGKVIIQSNDPEQPLYRYLTDNDYEGFFRQQAAERKLFNYPPYSR
LIRIVIKDKDEQKAEVEARAFAGLLRPSLHERLLGPSKPAVAKIQLYHIREILLKLEIGL
SPQKIRKLIKKSEQRMRANPEFKYMRVYYDVDPL
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccgatgtagtactgcctttgcccttatccgaaacgtttacctatgccgttccg
gcgtccatgcaaagtgcgctggcaatcggatgcagagtcatcgttcctttcggaaaacgc
aagtactatacggctattgttcttaaaatacatcacgacgccccacagagcggcgtctcc
ttaaaagatatccattccctgatcgattccgttccgttggtgaacgaaaatcaactgaaa
ttatgggagtgggtatctttttattacctgtcgcctttaggcgatgtttacaaagcggca
tttccttccaaactgaggatggaaagcgaaacgatggtatccgccctcgtagggcacgcc
accgatgaaaagggattgcgtccaaaggaaaaacaaatcatcgacctgctgaacgagcat
gaccttccggtaaagatatccgaaatcgccgtccgcctgaaaatcgggaatgtcctaccg
acagtttattcgttagcagaaaaaggcttggtcgtaatccacgaatccatccaaagtaag
tttgcgcccaagaccgaaacacatattttcctcccgaagaaattatctccccaatccgcc
tcgcacgcaatcggcaaagcaaaaaagcaacagttgctctacgaacagatcactggcatt
tttgccgctagcgaagcggactcctttagtcgcaaagagatcatggctctcaccggcgct
tcggcttccgtattgaacggactattgcagaaaaacgtcctacggcaggcgaccgtcgaa
atcgggcgcctgggcgacggcgcagcaagggttacccgtgctcctcacacgctcaatgaa
tatcaacagcaagctttcaccgagattatcgactgctttaacgaccggaagccgtgcctg
ttgcatggcgttacctccagtggaaaaaccgaaatctacattcatctgatcaagcgcctg
ctggaagagggcaaacagacgctgtatttagttcccgaaatagcgcttaccacacagctt
acgcatcgtttgcaagcggttttcggcgacaagctggcgatctatcactccaaaataaac
gatcaggaacgggcggagatctggaagaaaatgctgtcggatcatccgtatgacatcgtc
atcggcgtacgctcatcgcttttcctgccctttaaaagattgggattgattattgtcgac
gaggagcatgaaagcagttataaacaaacggaaccggctccccgataccaggcccgcgat
acggccgttatgctcgctcatctcacgaaggctcctattttgctgggtaccgccacgcct
tccatggaatcgtattttaatgcccaaacggggaaatacgggctcgtcacgctggccaac
cgctatgaagatatctcgctgcccgaaatcattttggaaaataccaaagagctgcgtcgc
aagaaaaaaatgaaatccttgctctctccggcgctcattagttatatggataacgcgttg
caggaaggcggacaggtcattcttttccgcaaccggcgaggctttgcgcccatggtcgag
tgccagctttgcggctggacacccaaatgccggcggtgcgatgtcagcctcacgtatcat
aaatcgcgcaatgaactcgtttgccattattgcggcacaacgtataaaatggtgacggaa
tgccccgagtgccatcaaccaagtatcgaaccggtaggaatgggcacggagcaagtggaa
gaagaagtggcgcggctttttccggaagtctccatcgcccgcatggatgcggataccacc
cggggcaaaaatgcatatgagaatattctttcggactttcagcaaaaaaagacccgcatt
cttatcggtacgcaaatgttatcgaaaggattggattttgacgatgtcagcgtagtaggc
atcatctcggcagacagcttgctgaattatcccgatttccgctcacacgaacggggcttt
cagctaatgatgcaggccagcggacgggcaggccgtaaaaacaaacgcgggaaggtgatt
attcaaagcaatgatccggaacaaccgttataccgttaccttacggacaacgactacgag
gggttcttcaggcaacaagccgcggaacggaaactgttcaactatccgccttattcgcgc
cttatccgtattgtcatcaaagataaagacgagcaaaaagccgaagttgaagcccgcgct
tttgccgggcttctccggccgtcactgcacgagcgtctgctgggcccgagcaaacccgcc
gtggctaaaatccaattataccacatccgggaaattctcttaaaactcgaaatcggatta
tctccgcaaaaaatcaggaaacttattaagaagtcggagcaacgcatgcgcgccaacccc
gaattcaaatacatgcgggtctattatgatgtagatccgttatag
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