KEGG   Limibacterium fermenti: ABNK31_15400
Entry
ABNK31_15400      CDS       T10860                                 
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
lfg  Limibacterium fermenti
Pathway
lfg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lfg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    ABNK31_15400 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lfg03400]
    ABNK31_15400 (ruvB)
Enzymes [BR:lfg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ABNK31_15400 (ruvB)
DNA repair and recombination proteins [BR:lfg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     ABNK31_15400 (ruvB)
    RecFOR pathway proteins
     ABNK31_15400 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_3 AAA_22 AAA_16 Mg_chelatase nSTAND3 TIP49 NB-ARC TsaE AAA_14 AAA_18 NTPase_1 AAA_33 Rad17 NPHP3_N RNA_helicase AAA_28 ABC_tran AAA_17 AAA_PrkA AAA_24 NACHT
Other DBs
NCBI-ProteinID: XGS82915
LinkDB
Position
3564603..3565628
AA seq 341 aa
MEETFDIHSNRHFQEPEREFENALRPLTFASFNGQEKIVENLNIFVRAARLRGESLDHVL
LHGPPGLGKTTLSNIIANELGVGFRVTSGPVLDKPGDLAGILTSLEANDVLFIDEIHRLA
PVVEEYLYSAMEDYRIDILIDKGPSARSIQIDLNPFTLIGATTRSGLLTSPLRARFGINM
HLEYYDMETLTGIVLRSAGILKIGCDRRAAEEIASRSRGTPRVANALLRRVRDFAQIKGT
GKIDHAIASYALEALNIDVHGLDEIDNKILLTIIDKFNGGPVGITTIATAVGDDAGTIEE
VYEPFLIKEGFIKRTPRGREATDLAYRHLGRKRQEEQGLLF
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggaagaaacctttgatatacatagcaaccgccattttcaagaacccgaacgggaattt
gagaatgcattgcgcccgctcacttttgccagcttcaacggtcaggagaagatcgtcgag
aacctcaatatattcgtccgtgccgcccgcttacggggcgaatcgctcgatcatgtgtta
ttgcacggccctcccgggctgggaaagaccacgctttccaacattatcgccaatgagttg
ggcgtcgggttcagggtgacttccggaccggtgttggataagccgggcgacttggccggt
atcctgacctccctcgaagcgaacgatgtattgttcatcgacgaaatacaccggttagcc
ccggtggtagaagaatatctatatagtgcgatggaagattaccgtatcgatatcctcatc
gataaaggccccagcgcacgttccatccagattgacttgaacccgttcaccctgatcggg
gcgacaacgcgcagcggattgctcaccagccccttgcgcgcgcgtttcggcatcaatatg
cacttggaatattatgatatggaaacgcttacgggcattgtattacggtcggccggcatt
ttaaaaatcggctgcgaccgccgggccgccgaagaaatcgcttcccgtagccgcggcacg
cctcgcgttgcgaatgcccttttgcgacgggtgcgtgactttgcgcaaatcaaaggcacg
ggtaagatcgatcacgccatcgcatcgtatgccctggaagcattgaatatcgacgttcat
ggattggacgaaatagacaacaaaatcctactgaccatcatcgacaaattcaacggcgga
ccggtaggcattaccaccatcgccaccgcggtaggtgatgatgccggaacaatcgaagag
gtttacgaacctttcctgattaaggaaggatttattaaacgaacgccccgaggccgcgaa
gcaaccgacttggcttatcgtcatttaggacgtaaacgtcaagaagaacaaggactgctg
ttttaa

DBGET integrated database retrieval system