Limibacterium fermenti: ABNK31_15400
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Entry
ABNK31_15400 CDS
T10860
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lfg Limibacterium fermenti
Pathway
lfg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABNK31_15400 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfg03400
]
ABNK31_15400 (ruvB)
Enzymes [BR:
lfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABNK31_15400 (ruvB)
DNA repair and recombination proteins [BR:
lfg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABNK31_15400 (ruvB)
RecFOR pathway proteins
ABNK31_15400 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_3
AAA_22
AAA_16
Mg_chelatase
nSTAND3
TIP49
NB-ARC
TsaE
AAA_14
AAA_18
NTPase_1
AAA_33
Rad17
NPHP3_N
RNA_helicase
AAA_28
ABC_tran
AAA_17
AAA_PrkA
AAA_24
NACHT
Motif
Other DBs
NCBI-ProteinID:
XGS82915
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All DBs
Position
3564603..3565628
Genome browser
AA seq
341 aa
AA seq
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MEETFDIHSNRHFQEPEREFENALRPLTFASFNGQEKIVENLNIFVRAARLRGESLDHVL
LHGPPGLGKTTLSNIIANELGVGFRVTSGPVLDKPGDLAGILTSLEANDVLFIDEIHRLA
PVVEEYLYSAMEDYRIDILIDKGPSARSIQIDLNPFTLIGATTRSGLLTSPLRARFGINM
HLEYYDMETLTGIVLRSAGILKIGCDRRAAEEIASRSRGTPRVANALLRRVRDFAQIKGT
GKIDHAIASYALEALNIDVHGLDEIDNKILLTIIDKFNGGPVGITTIATAVGDDAGTIEE
VYEPFLIKEGFIKRTPRGREATDLAYRHLGRKRQEEQGLLF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaacctttgatatacatagcaaccgccattttcaagaacccgaacgggaattt
gagaatgcattgcgcccgctcacttttgccagcttcaacggtcaggagaagatcgtcgag
aacctcaatatattcgtccgtgccgcccgcttacggggcgaatcgctcgatcatgtgtta
ttgcacggccctcccgggctgggaaagaccacgctttccaacattatcgccaatgagttg
ggcgtcgggttcagggtgacttccggaccggtgttggataagccgggcgacttggccggt
atcctgacctccctcgaagcgaacgatgtattgttcatcgacgaaatacaccggttagcc
ccggtggtagaagaatatctatatagtgcgatggaagattaccgtatcgatatcctcatc
gataaaggccccagcgcacgttccatccagattgacttgaacccgttcaccctgatcggg
gcgacaacgcgcagcggattgctcaccagccccttgcgcgcgcgtttcggcatcaatatg
cacttggaatattatgatatggaaacgcttacgggcattgtattacggtcggccggcatt
ttaaaaatcggctgcgaccgccgggccgccgaagaaatcgcttcccgtagccgcggcacg
cctcgcgttgcgaatgcccttttgcgacgggtgcgtgactttgcgcaaatcaaaggcacg
ggtaagatcgatcacgccatcgcatcgtatgccctggaagcattgaatatcgacgttcat
ggattggacgaaatagacaacaaaatcctactgaccatcatcgacaaattcaacggcgga
ccggtaggcattaccaccatcgccaccgcggtaggtgatgatgccggaacaatcgaagag
gtttacgaacctttcctgattaaggaaggatttattaaacgaacgccccgaggccgcgaa
gcaaccgacttggcttatcgtcatttaggacgtaaacgtcaagaagaacaaggactgctg
ttttaa
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