Limibacterium fermenti: ABNK31_15935
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Entry
ABNK31_15935 CDS
T10860
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
lfg Limibacterium fermenti
Pathway
lfg00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ABNK31_15935 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lfg01007
]
ABNK31_15935 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfg03016
]
ABNK31_15935 (lysS)
Enzymes [BR:
lfg01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
ABNK31_15935 (lysS)
Amino acid related enzymes [BR:
lfg01007
]
Aminoacyl-tRNA synthetase
Class II (A)
ABNK31_15935 (lysS)
Transfer RNA biogenesis [BR:
lfg03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
ABNK31_15935 (lysS)
Prokaryotic type
Other AARSs
ABNK31_15935 (lysS)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
DUF4332
tRNA-synt_2d
tRNA_anti_2
DUF1844
Motif
Other DBs
NCBI-ProteinID:
XGS83017
LinkDB
All DBs
Position
complement(3689004..3690734)
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AA seq
576 aa
AA seq
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MHHVELSEQEIIRRQSLDELRTHGINPYPADLYQVDAYSTDIKNEFTDEAGRRQVSIAGR
IMNRRIMGKASFFELQDSKGRIQVYITRDDICPDENKDLYNIVFKKLLDIGDFVGITGFV
FRTQMGEISVHAQSLTVLSKSLRPLPVVKMKDGVAYDKFSDPELRYRQRYVDLLVNDHVK
EIFLKRTKIFNAMREYFNHHGYLEVDTPVLQSIPGGAAARPFITHHNALDIDLYLRVANE
LYLKRLIVGGFEGVYEFSRDFRNEGMDRTHNPEFTVMEIYVAYKDYKWMMEFTEQMLEYT
ALQVLGTTKTKVGEQEIDFKAPYKRITMLDAIKEHTGIDISGMNEQQLREVCDRLGVEYD
ETMGKGKLIDEIFGEKCEASYIQPTFIIDYPIEMSPLCKRHRDNPELTERFELMVNGKEL
ANAYSELNDPIDQRERFEEQLRLSEKGDDEAMYIDQDFLRALEYGMPPTAGMGIGMDRLT
MLLTGQTTIQEVLLFPQMRPEKTVQKDADQAYIQVGVPEEWIPVLQKAGYNRVADLKEVN
PNKLHQEICGLNKKLKMGLNNPAPDEVKEWTTRAGE
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacgtagaacttagtgaacaagaaattattcgcagacaaagtctcgatgagtta
cgcacgcatggaataaatccttatccggctgatctatatcaggtcgatgcctactctacc
gatattaaaaacgagtttaccgacgaagccggacggcggcaggtaagcattgccgggcgt
attatgaaccgccgtatcatgggtaaagcttctttcttcgaactgcaagactcgaaaggc
agaatacaagtgtatattacccgcgacgatatctgtcccgacgagaataaagacctttat
aacatcgtatttaaaaaactactcgacataggcgattttgtcggtattaccggttttgtg
ttccgcacgcagatgggcgaaatatcggtacatgcacaatccctcaccgttttatccaaa
tcgttacgtcccctgcccgttgtcaaaatgaaagacggggtggcttacgataagttttcc
gatcccgaactgcgttaccggcagcggtatgtcgacttgctggtcaacgatcacgtaaaa
gagatttttttaaagcgtacgaaaatattcaatgccatgcgcgaatatttcaatcatcac
ggttatctggaagtcgatacgcccgtattgcaaagcattccgggaggagcggcggcgcgt
ccgttcatcacgcatcacaatgccctcgatatcgatttgtatctgcgcgtcgcgaacgag
ctctatctaaaacggctcatcgtgggaggcttcgaaggcgtgtatgaattttcgcgggat
ttccgtaacgaagggatggaccggacgcataacccggagtttacggtgatggaaatctat
gtggcgtataaagattataaatggatgatggagttcaccgagcaaatgctcgagtatacc
gccctgcaagtgttgggtaccaccaaaacaaaggtcggcgaacaggaaatcgacttcaag
gcgccttacaagcgcatcacgatgctcgacgccatcaaagagcataccggcatcgatatc
agcggtatgaacgaacagcagttgcgcgaagtatgcgaccggttgggggtagaatatgac
gaaaccatggggaaaggaaaacttatcgatgagatattcggcgaaaagtgcgaggcttcg
tatatccagccgacttttatcattgattatcccattgaaatgtcgccgttatgcaagcgc
catcgcgacaatcccgaactgaccgaacgtttcgaactaatggtaaacgggaaggaactg
gcgaatgcgtactctgaattaaatgacccgatcgaccaacgcgagcgcttcgaagagcaa
ttgcgcctttcggaaaaaggggacgacgaagcgatgtatatcgatcaggacttcctccgc
gccctcgaatacggaatgccgcctacggcagggatgggaatcggaatggaccgcctgacg
atgttgctcaccggacagacaaccattcaggaagtgcttctcttcccccaaatgcgtccc
gagaaaaccgttcaaaaagatgccgaccaggcttatattcaggtgggagtcccggaagag
tggatccccgtgttgcaaaaggccggatataaccgtgtcgcggatttgaaagaggtaaat
cccaacaaattacaccaggaaatttgcggattgaataagaaactgaaaatgggtttgaac
aatcctgctcccgatgaagttaaagaatggacaacccgtgccggcgaataa
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