Limibacterium fermenti: ABNK31_17205
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Entry
ABNK31_17205 CDS
T10860
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lfg Limibacterium fermenti
Brite
KEGG Orthology (KO) [BR:
lfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfg03016
]
ABNK31_17205 (truA)
Enzymes [BR:
lfg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ABNK31_17205 (truA)
Transfer RNA biogenesis [BR:
lfg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABNK31_17205 (truA)
Prokaryotic type
ABNK31_17205 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Piwi_N
Motif
Other DBs
NCBI-ProteinID:
XGS83255
LinkDB
All DBs
Position
complement(4012816..4013583)
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AA seq
255 aa
AA seq
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MKRFFITLAYNGKNYAGWQIQPNGPSIQQTLQEALSVILRASVQAVGAGRTDAGVHARCM
TAHFDWDGAPFDTEALTAKLNSFLPKDIVLFDIKEVRPDAHARFSAVARTYSYHVTTAKD
AFLHDYKYRVFFRPDIDAMNALCPVLMQYDDFTSFSKLHTDVKTNLCRIQAAQWVQQGND
YIFTIKADRFLRNMVRAIVGTLLEAGRGRLDERGFRRIIEARNRNVAGDSVPAHALFLEQ
VDYPEDIRLETGDIR
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgttttttcatcaccctggcatataacggaaagaactatgcaggctggcaaata
cagcccaacggccccagcatacagcagacgttgcaggaagcgttgtccgtcattctgcgc
gcttccgtccaggcggtcggcgccggacgcaccgatgcgggagtacatgcccgctgcatg
acggcgcatttcgattgggatggcgcgccgttcgacaccgaggccttgacggccaaactc
aacagctttctacccaaagatatcgtcctcttcgatataaaagaggtccgtcccgatgcg
catgcccgcttctcggccgtggcgcgtacttattcctaccacgtaaccaccgctaaagac
gctttcctgcatgattacaagtaccgtgtcttcttccgtcccgatatcgacgccatgaac
gccctttgccccgtactgatgcagtacgacgactttaccagcttcagtaaattgcatacg
gacgtcaaaaccaacctctgccgcatccaagccgcacaatgggtacaacaaggcaacgac
tacatattcaccattaaggctgaccgcttcctccggaacatggtgcgcgccatcgtcggc
accttactcgaagccggacgcggacgactcgacgagcgcggcttccgacgcattatcgag
gcccgcaaccgaaatgtcgccggcgattcggtacccgcgcacgcgctcttcctcgagcaa
gtcgattatcccgaagacattcggctggagactggagacattagataa
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