KEGG   Lysobacter firmicutimachus: ABU614_03140
Entry
ABU614_03140      CDS       T11708                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
lfh  Lysobacter firmicutimachus
Pathway
lfh00010  Glycolysis / Gluconeogenesis
lfh00020  Citrate cycle (TCA cycle)
lfh00260  Glycine, serine and threonine metabolism
lfh00280  Valine, leucine and isoleucine degradation
lfh00310  Lysine degradation
lfh00380  Tryptophan metabolism
lfh00620  Pyruvate metabolism
lfh00630  Glyoxylate and dicarboxylate metabolism
lfh00640  Propanoate metabolism
lfh00670  One carbon pool by folate
lfh00785  Lipoic acid metabolism
lfh01100  Metabolic pathways
lfh01110  Biosynthesis of secondary metabolites
lfh01120  Microbial metabolism in diverse environments
lfh01200  Carbon metabolism
lfh01210  2-Oxocarboxylic acid metabolism
lfh01240  Biosynthesis of cofactors
Module
lfh_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lfh_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lfh_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
lfh_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
lfh_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:lfh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    ABU614_03140 (lpdA)
   00020 Citrate cycle (TCA cycle)
    ABU614_03140 (lpdA)
   00620 Pyruvate metabolism
    ABU614_03140 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    ABU614_03140 (lpdA)
   00640 Propanoate metabolism
    ABU614_03140 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    ABU614_03140 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    ABU614_03140 (lpdA)
   00310 Lysine degradation
    ABU614_03140 (lpdA)
   00380 Tryptophan metabolism
    ABU614_03140 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    ABU614_03140 (lpdA)
   00670 One carbon pool by folate
    ABU614_03140 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lfh04147]
    ABU614_03140 (lpdA)
Enzymes [BR:lfh01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     ABU614_03140 (lpdA)
Exosome [BR:lfh04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   ABU614_03140 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Biotin_lipoyl BSH_YknX FAD_oxidored Pyr_redox_3 NAD_binding_8 FAD_binding_2 BSH_CusB GCV_H GIDA HI0933_like AlaDh_PNT_C BSH_RND 3HCDH_N BSH_YhbJ DUF6264 BSH_Fcp1 DUF478 FAD_binding_3 BSH_CzcB
Other DBs
NCBI-ProteinID: XCO75803
UniProt: A0AAU8MTM6
LinkDB
Position
complement(733199..735031)
AA seq 610 aa
MASSIEVKVPDIGDYDDVPVIELLVAVGDTVKKDQSLVTLESDKATMEVPSSADGVVKSL
NVKVGDKVSEGAVIAILESADLESADSAHGAAAKPAAAAPAAETQPAPAAAAPVQAPKPA
AAPAPAAAAASGRKADLECRMLVLGSGPGGYTAAFRAADLGLDTVLVERYASLGGVCLNV
GCIPSKALLHAAAVIDEAEHAGDYGVSFGKPTIDLAALRKYKEKVVGQLTKGLAGMAKQR
KVRTVTGVGTFVSAHELEVQGEAGTQLIRFEQCIIAAGSQAVKLGNFPWDDPRVMDSTDA
LELVEVPARLLVVGGGIIGLEMATVYRALGSEVTVVEFMDQLMPGADPDLVKPLADRLKK
QGVTVHLKTKAAATEALKDGIKVSFESAEAGKAPVLESGVYDRVLVAVGRAPSGAKIGAD
KAGVQVTERGFIPVDRQMRTNVPHIFAIGDLVGNPMLAHKATHEGKLAAEVAAGEKKEWV
ARVIPSVAYTDPEIAWVGVTEAEAKAKGLRVGVGKFPWAASGRAIGLGRTEGFTKLVFDE
ATHRIVGGGIVGVHAGDLIAEVALAIEMGCEVADIGHTIHPHPTLSESVGMAAEVFDGTI
TDLYIPKKKG
NT seq 1833 nt   +upstreamnt  +downstreamnt
atggccagcagcatcgaagtaaaggtccccgacatcggcgattacgacgacgtacccgtg
atcgaattgctggtcgcggtcggcgacacggtcaagaaggaccagagcctggtcaccctg
gagtcggacaaggcgacgatggaagtgccctcgtcggccgacggcgtggtcaagtcgctc
aacgtcaaggtcggcgacaaggtctccgagggcgcggtcatcgccatcctcgaaagtgcc
gacctcgaaagtgccgatagcgcccatggcgcagcggccaagccggccgctgccgccccc
gccgcggaaacccagcccgcgccggccgccgccgcgccggtccaggcgcccaagccggcc
gccgcgccggcgcccgccgccgcggccgccagcggccgcaaggccgacctcgagtgtcgc
atgctggtgctcggttccggccccggcggctacaccgccgcgttccgcgctgccgacctc
ggcctggacacggtcctggtcgagcgctacgccagcctcggcggcgtctgcctcaacgtc
ggctgcatcccctccaaggcgctgctgcatgccgccgcggtgatcgacgaggccgaacac
gccggcgactacggcgtcagcttcggcaagccgacgatcgacctggccgcgctgcgcaag
tacaaggagaaagtggtcggccagctgaccaagggcctggccggcatggccaagcagcgc
aaggtccgcaccgtgaccggcgtcggcaccttcgtctcggcccacgagctggaagtgcag
ggcgaggccggcactcagctgatccgtttcgagcaatgcatcatcgccgccggttcgcag
gcggtgaagctgggcaatttcccctgggacgacccgcgggtgatggactccaccgacgcg
ctggaactggtcgaagtgccggccaggctgctggtggtcggtggcggcatcatcggcctg
gaaatggcgaccgtgtaccgcgcgctcggcagcgaggtcaccgtggtcgagttcatggac
cagctgatgccgggcgccgatccggacctggtcaagccgctcgccgaccggctcaagaag
cagggcgtgacggtgcatctgaagaccaaggccgccgccaccgaagccttgaaggacggc
atcaaggtctcgttcgaaagcgccgaagccggcaaggccccggtgctggaatcgggcgtc
tacgaccgcgtcctggtcgcggtcggccgcgcgcccagcggcgccaagatcggcgccgac
aaggccggggtccaggtcaccgagcgcggcttcattccggtcgaccggcagatgcgtacc
aacgtgccgcacatcttcgccatcggcgatctggtcggcaatccgatgctggcgcacaag
gccacccacgagggcaagctcgcggccgaagtcgccgccggcgagaagaaggagtgggtg
gcgcgggtgattccgtcggtggcctacaccgatccggaaatcgcctgggtcggcgtcacc
gaggccgaagccaaggccaagggcctgcgcgtcggggtgggcaagttcccgtgggcggcc
agcggccgcgccatcggcctgggccgcaccgagggcttcaccaagctggtcttcgacgaa
gccacccaccgcatcgtcggcggcggcatcgtcggcgtgcacgccggcgacctgatcgcc
gaggtcgccctcgccatcgagatgggctgcgaagtcgccgacatcggccacaccatccac
ccgcacccgaccctgagcgagtcggtcggcatggcggccgaagtgttcgacggcaccatc
accgatctgtacatcccgaagaagaagggctga

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