Lysobacter firmicutimachus: ABU614_11740
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Entry
ABU614_11740 CDS
T11708
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
lfh Lysobacter firmicutimachus
Pathway
lfh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lfh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABU614_11740
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
lfh02022
]
ABU614_11740
02035 Bacterial motility proteins [BR:
lfh02035
]
ABU614_11740
Two-component system [BR:
lfh02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
ABU614_11740
Bacterial motility proteins [BR:
lfh02035
]
Pilus system
Twitching motility proteins
ABU614_11740
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_16
HTH_50
AAA_5
Mg_chelatase
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
XCO73086
LinkDB
All DBs
Position
complement(2709590..2711005)
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AA seq
471 aa
AA seq
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MAETRSALVVDDERDIRELLVMTLGRMGLRCDTASGIGEARSQLLRNRYDLCLTDMRLPD
GSGMELVAEISQKYPNTPVAMITAFGNVEAAVEALKAGAFDFVAKPVDLAVLRDLVRHAL
ELNDTRRSASEAVGSRLYGESPAMIKLRQTLAKVARSQAPVYIAGESGVGKELVARTIHS
EGGRADGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQAADGGTLFLDEVAE
LPLPMQVKLLRAIQEKSIRPVGAQAEVVVDVRILSATHKDLAALVADGRFRQDLYYRINV
IELRVPPLRERLDDLPGLAAKILQRLAGNQGRLVPRLGDDALEALRAYGFPGNVRELENI
LERALALAEGEVLNAGDLRLPRLATQGVPADAGANAGSAAPTAAAAAAVDPRTLNPRDTA
TSALPSYIEEIERAAIQQALQENRYNKTRTAAALGITFRALRYKLKKLGID
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaacccgtagtgcattggtagtcgacgacgagcgcgacattcgcgagttgctc
gtcatgactttgggccgtatgggcctgcgttgcgacaccgcgtccggcatcggcgaggcg
cgcagtcagctgctgcgcaatcgttacgatttgtgcctgaccgacatgcgcctgcccgac
ggctcgggcatggagctggtcgccgaaatcagtcagaaataccccaataccccggtcgcg
atgatcaccgccttcggcaacgtcgaagcggcggtggaagcactcaaggccggcgcgttc
gatttcgtcgccaagccggtcgacctggccgtgctgcgcgatctcgtgcgtcacgcactg
gagctcaacgatacccgccgcagcgccagcgaagcggtcggctcgcgcctgtacggcgaa
tcgccggcgatgatcaagctgcgccagaccctggccaaggtcgcgcgcagccaggcgccg
gtctatatcgccggcgaatccggcgtgggcaaggagttggtcgcccgtacgatccattcc
gaaggcggccgcgccgacggcccgttcgtgccggtcaactgcggcgcgatcccggccgag
ctgatggaaagcgaattcttcggccacaagaagggcagcttcaccggcgcccacgccgac
aagcccggcctgttccaggccgcggacggcggcaccctgttcctcgacgaggttgccgag
ctgccgctgccgatgcaggtcaagctgctgcgcgcgatccaggaaaagtcgatccgcccg
gtcggcgcgcaggccgaagtggtggtcgacgtgcgcatcctgtcggcgacccacaaggac
ctcgccgcgctggtcgccgacggccgcttccgccaggacttgtactaccgcatcaacgtt
atcgagctgcgcgtgccgccgctgcgcgagcgcctcgacgacctgcccggcctggccgcc
aagatcctgcagcgcctggccggcaatcagggccggctggtgccgcgcctgggcgacgac
gcactggaagcgctgcgcgcctacggcttccccggcaacgtgcgcgaactggagaacatc
ctcgaacgcgccctggccctggccgaaggcgaagtgctcaacgccggcgacctgcgcctg
ccgcgcctggcgacccaaggcgtcccggccgacgccggcgcgaacgccggcagcgccgcg
cccaccgcagcggccgccgccgccgtcgatccgcgcacgctcaatccgcgcgacaccgcc
accagcgccctgccctcgtacatcgaggagatcgagcgcgcggcgatccagcaggcattg
caggaaaaccgctacaacaagacccgcacggccgcggcgctgggcatcacgttccgcgcc
ctgcgctacaagctcaagaagctcggcatcgactga
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