Lysobacter firmicutimachus: ABU614_16290
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Entry
ABU614_16290 CDS
T11708
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
lfh Lysobacter firmicutimachus
Pathway
lfh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lfh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ABU614_16290 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lfh01007
]
ABU614_16290 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfh03016
]
ABU614_16290 (serS)
Enzymes [BR:
lfh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
ABU614_16290 (serS)
Amino acid related enzymes [BR:
lfh01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
ABU614_16290 (serS)
Transfer RNA biogenesis [BR:
lfh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ABU614_16290 (serS)
Prokaryotic type
ABU614_16290 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
KASH_CCD
Filament
Nucleoprot-TPR
DUF8429
DUF948
Motif
Other DBs
NCBI-ProteinID:
XCO73938
LinkDB
All DBs
Position
3706020..3707312
Genome browser
AA seq
430 aa
AA seq
DB search
MLDPTLLRQQPADLAERLRAARGYDLDPAVLESLESERKQIQVRTQELQNLRNTKSKLIG
QLKAKGEDVAAVMAEVAGFGDELKASETRLEAIKAEIEAIALGLPNLPHASVPAGKDEND
NVEQHRWGRPRAFDFEVKDHVELGARNGWLDGDTAAKLSGARFTVLRGGLARLHRALAQF
MLDLHVGEHGYEETSVPLLVNADSMRGTGQLPKFEDDLFATVVGEGEAASKRYLIPTSEV
PLTNIVRDEILEDAALPLRMSAHSMCFRAEAGSHGRDTRGMIRQHQFEKVELVSIVRPDE
SYDEHERMTRCAEVVLEKLGLPYRRVLLCTGDMGFAAAKTYDLEVWLPSQNTYREISSCS
NCEAFQARRMQARWRNPATGKPELAHTLNGSGVAVGRAMIAVMENYQNADGSIAVPEALR
PYMGGIETLA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatccgaccctgctgcgccaacagcccgccgacctcgccgaacgcctgcgcgct
gcgcgcggctacgacctcgacccggccgtgctggaatcgctggaaagcgagcgcaagcag
atccaggtgcgcacccaggaactgcagaacctgcgcaacaccaagtccaagctgatcggc
cagctcaaggccaagggcgaggacgtggccgcggtgatggccgaagtcgccggtttcggc
gacgagctcaaggccagcgaaacccgcctggaagcgatcaaggccgagatcgaggccatc
gccctgggcctgcccaacctgccgcacgcctcggtgccggccggcaaggacgagaacgac
aacgtcgaacagcatcgctggggccgcccgcgcgcgttcgacttcgaggtcaaggaccac
gtcgaactcggcgcccgcaacggctggctcgacggcgacaccgccgccaagctgtccggc
gcgcgcttcaccgtgctgcgcggcggcctggcccggctgcaccgcgcgctggcccagttc
atgctcgacctgcacgtcggcgagcacggctacgaggaaaccagcgtgccgctgctggtc
aacgccgactcgatgcgcggcaccggccagttgcccaagttcgaggacgacctgttcgcg
accgtggtcggcgaaggcgaggcggcaagcaagcgttatctgatcccgacgtcggaagtg
ccgctgaccaacatcgtccgcgacgagatcctcgaggacgccgcgctgccgctgcgcatg
agcgcgcattcgatgtgtttccgcgccgaagccggcagccacggccgcgacacccgcggc
atgatccgccagcaccagttcgagaaggtcgaactggtcagcatcgtccgcccggacgag
agctacgacgagcacgagcgcatgacccgctgcgccgaagtggtgctggagaagctcggc
ctgccgtaccgccgggtgctgctgtgcaccggcgacatgggcttcgccgcggccaagacc
tacgacctggaagtctggctgccgagccagaacacctaccgcgagatctcttcctgctcg
aactgcgaagccttccaggcccggcgcatgcaggcgcgctggcgcaacccggccaccggc
aagccggaactcgcccacaccctcaacggctccggcgtcgcggtcggccgggcgatgatc
gcggtgatggagaactaccagaacgccgacggcagcatcgccgtgcccgaagcgctgcgc
ccgtacatgggcggcatcgagacgctggcctga
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