KEGG   Lysobacter firmicutimachus: ABU614_18630
Entry
ABU614_18630      CDS       T11708                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
lfh  Lysobacter firmicutimachus
Pathway
lfh00010  Glycolysis / Gluconeogenesis
lfh00020  Citrate cycle (TCA cycle)
lfh00260  Glycine, serine and threonine metabolism
lfh00280  Valine, leucine and isoleucine degradation
lfh00310  Lysine degradation
lfh00380  Tryptophan metabolism
lfh00620  Pyruvate metabolism
lfh00630  Glyoxylate and dicarboxylate metabolism
lfh00640  Propanoate metabolism
lfh00670  One carbon pool by folate
lfh00785  Lipoic acid metabolism
lfh01100  Metabolic pathways
lfh01110  Biosynthesis of secondary metabolites
lfh01120  Microbial metabolism in diverse environments
lfh01200  Carbon metabolism
lfh01210  2-Oxocarboxylic acid metabolism
lfh01240  Biosynthesis of cofactors
Module
lfh_M00009  Citrate cycle (TCA cycle, Krebs cycle)
lfh_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
lfh_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
lfh_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
lfh_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:lfh00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    ABU614_18630 (lpdA)
   00020 Citrate cycle (TCA cycle)
    ABU614_18630 (lpdA)
   00620 Pyruvate metabolism
    ABU614_18630 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    ABU614_18630 (lpdA)
   00640 Propanoate metabolism
    ABU614_18630 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    ABU614_18630 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    ABU614_18630 (lpdA)
   00310 Lysine degradation
    ABU614_18630 (lpdA)
   00380 Tryptophan metabolism
    ABU614_18630 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    ABU614_18630 (lpdA)
   00670 One carbon pool by folate
    ABU614_18630 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lfh04147]
    ABU614_18630 (lpdA)
Enzymes [BR:lfh01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     ABU614_18630 (lpdA)
Exosome [BR:lfh04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   ABU614_18630 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox GIDA HI0933_like AlaDh_PNT_C FAD_binding_2 FAD_binding_3 FAD_oxidored 3HCDH_N Pyr_redox_3 DAO NAD_binding_8 Lycopene_cycl Thi4 2-Hacid_dh_C XdhC_C Amino_oxidase
Other DBs
NCBI-ProteinID: XCO74375
UniProt: A0AAU8MPM0
LinkDB
Position
4261768..4263192
AA seq 474 aa
MSEQFDVVVIGAGPAGYHAAIRAAQLGLKTACIDAALGKDGKPALGGTCLRVGCIPSKAL
LDSSRQFWNLQHLFGEHGISADNAKIDVATMVGRKDKIVKQFTGGIAMLFKANKVAPFYG
FGTLHPGNVVKVKQHDGSEVELKGTNVIIAAGSDSIELPFAKFDGDKIVDNVGALDFTSV
PKRLGVIGAGVIGLELGSVWKRLGAQVTILEALPDFLAAADAEVAKTAAKEFKKQGLDIK
LGAKVSKAEIKGDEVHLTYNDGKADQQLVVDKLLVAVGRRAASKGLLAEGTGVKLNERGQ
IEVDEHCHTGVDGVWAIGDCVRGPMLAHKGFEEGIAVAELIAGLPGHVNFDTIPWVIYTE
PEIAWVGRTEQQLKAEGVPYKTGSFPFAAIGRAVAMGEPAGFVKVIAHAETDRVLGLHLV
GVGVSELVHEGVLTMEFKGSADDLARICHAHPTLSEAIHDAAMAVDKRAIHKAN
NT seq 1425 nt   +upstreamnt  +downstreamnt
atgagcgaacaattcgacgtagtcgtcatcggcgccggtccggccggctaccacgccgcc
atccgcgccgcccagctcggcctgaagaccgcctgcatcgacgccgcgctcggcaaggac
ggcaagcccgccctaggcggcacctgcctgcgcgtgggctgcattccgtccaaggccctg
ctcgacagctcgcgccagttctggaacctgcagcacctgttcggcgagcacggcatcagc
gccgacaacgccaagatcgacgtcgcgaccatggtcggccgcaaggacaagatcgtgaag
cagttcaccggcggcatcgcgatgctgttcaaggcgaacaaggtcgcgccgttctacggc
ttcggcaccctgcacccgggcaacgtggtcaaggtcaagcaacacgacggttccgaagtc
gagctcaagggcaccaacgtcatcatcgccgccggttcggactcgatcgaactgccgttc
gccaagttcgacggcgacaagatcgtcgacaacgtcggcgcgctggacttcacctcggtg
cccaagcgcctgggcgtgatcggcgccggcgtgatcggcctggagctgggcagcgtgtgg
aagcgcctgggcgcgcaggtcaccatcctcgaagccctgcccgacttcctcgccgccgcc
gatgccgaggtcgccaagaccgcggccaaggaattcaagaagcagggcctggacatcaag
ctcggcgccaaggtctccaaggccgagatcaagggcgacgaagtccacctgacctacaac
gacggcaaggccgaccagcaactggtcgtggacaagctgctggtggccgtcggccgccgc
gccgcctccaagggcctgctggccgaaggcaccggggtcaagctcaacgaacgcggccag
atcgaggtcgacgagcactgccataccggcgtcgatggtgtgtgggcgatcggcgactgc
gtgcgcggcccgatgctggcgcacaagggcttcgaggaaggcatcgcggtggccgaactg
atcgccggcctgcccggccacgtcaatttcgacaccattccgtgggtgatctacaccgag
ccggaaatcgcctgggtcggccgcaccgaacagcagctcaaggccgaaggcgtgccgtac
aagaccggcagcttcccgttcgcggcgatcggccgcgcggtggccatgggcgagccggcc
ggcttcgtcaaggtcatcgctcatgccgagaccgaccgcgtgctcggcctgcacctggtc
ggcgtcggcgtctccgaactggtccacgaaggcgtgctgaccatggagttcaagggctcc
gccgacgacctcgcccgcatctgccacgctcacccgaccctgtcggaagcgatccacgac
gcggcgatggcggtggacaagcgcgcgatccataaggccaattga

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