Leptospirillum ferriphilum ML-04: LFML04_0220
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Entry
LFML04_0220 CDS
T02319
Name
(GenBank) putative sigma-54-specific transcriptional regulator, Fis family
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
lfi
Leptospirillum ferriphilum ML-04
Pathway
lfi02020
Two-component system
lfi02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LFML04_0220
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LFML04_0220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lfi03000
]
LFML04_0220
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lfi02035
]
LFML04_0220
Transcription factors [BR:
lfi03000
]
Prokaryotic type
Helix-turn-helix
Other families
LFML04_0220
Bacterial motility proteins [BR:
lfi02035
]
Flagellar system
Flagellar assembly proteins
Others
LFML04_0220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
AAA
Mg_chelatase
MCM
HTH_30
bpMoxR
AAA_22
nSTAND3
HTH_50
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AFS52465
UniProt:
J9Z7E3
LinkDB
All DBs
Position
208279..209316
Genome browser
AA seq
345 aa
AA seq
DB search
MSVAFIGGSDPIRRLLALVERVARTDSTLLITGESGTGKERIARMIHEKSPRGRYPFVPV
NCGAIPDGLIESELFGHEKGAFTGAVSQRSGRFELAEGGTLFLDEIGELPLSLQVKLLRV
LQEKVYERVGGSQPRKANVRILAATHRNLEQMVREDLFREDLFYRLSVIPVDIPLLRLRV
TDISLLLDFFVNRWVEEGRGDPIRFSPEALRRLCLYEWPGNIRELENLVERFLVLKGGET
IELSDLPEKILGGTSTGSTSSDGPGNRDTRDAGTSAGRPLDLADLLEGESIDMPAYFLRL
ERAMIEKALARFSGNKTRAAAFLGINRTTLIEKLKRLEGLPPDHT
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcgcgttcattggaggctctgaccccatccgtcgccttctggctctggtggaa
cgggtggccaggacggattccaccctcctgatcacgggggaaagcggaaccggaaaagag
cgaatcgcacggatgattcacgagaaaagtccccgcggacgctaccctttcgttcccgtc
aactgcggagccattccggacggactgatcgagagcgaactgttcggtcacgaaaaggga
gccttcaccggagcggtcagccagcggtccggccgcttcgaactggcggaggggggaacc
ctgtttctggacgagatcggagaactccccctgtcccttcaggtgaagcttctgcgggtt
ttgcaggaaaaagtctatgagagagtcggcgggagccagccccgcaaggccaacgtccgc
attctggcagcgacccaccggaatctggagcagatggtccgggaggatctcttccgcgaa
gatctcttttaccgtctgtcggtcattcctgtcgatattcctctcttgcgcctgcgtgtc
accgatatcagcctgcttctcgacttttttgtgaaccgctgggttgaggaaggtcggggg
gaccccatccgtttttctccggaagccctccgtcggttgtgtttgtacgaatggcccgga
aacatccgcgaacttgaaaatctggtcgaacgctttcttgtcctcaagggaggcgagacg
attgagctttcggatcttcccgaaaagattcttggaggaacctccaccgggtcaacgtcg
tccgacggtccgggaaatcgggacacccgggatgccggcacatccgccggcaggccattg
gacctggcagaccttctggaaggggaaagcatcgatatgccggcttattttctccggctt
gaacgggccatgatcgaaaaagcgcttgcccgcttttccggaaacaagacccgggcggcg
gctttcctcgggatcaaccggacaaccctgatcgagaaattgaagcggctcgaaggactg
cctccagaccacacctga
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