Leptospirillum ferriphilum ML-04: LFML04_0344
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Entry
LFML04_0344 CDS
T02319
Symbol
ruvB
Name
(GenBank) putative crossover junction helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
lfi
Leptospirillum ferriphilum ML-04
Pathway
lfi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LFML04_0344 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfi03400
]
LFML04_0344 (ruvB)
Enzymes [BR:
lfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LFML04_0344 (ruvB)
DNA repair and recombination proteins [BR:
lfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LFML04_0344 (ruvB)
RecFOR pathway proteins
LFML04_0344 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
Mg_chelatase
AAA_22
NB-ARC
AAA_14
AAA_3
AAA_33
Sigma54_activat
bpMoxR
AAA_11
TsaE
nSTAND3
TIP49
Rad17
AAA_18
NACHT
ResIII
AAA_28
IstB_IS21
AAA_17
NPHP3_N
RNA_helicase
AAA_24
AAA_25
NTPase_1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AFS52586
UniProt:
J9Z8R8
LinkDB
All DBs
Position
complement(313108..314106)
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AA seq
332 aa
AA seq
DB search
MEPNEADLLTPEEFPEEIPDANLLRPRTFDHYVGQKDVIDSLKVAIQAALLREDTLDHIL
LHGPPGLGKTTLAALVARAMGVSFLASSGPALEKGGDLVGILTRLAPGTLLFIDEIHRLP
RPVEEILYSAMEDFSIDVVFDRGAAARTFRHRIPPFTLVGATTRAGLLSAPLRDRFGIQR
DLDFYQPPELARILERSAGILGIGIDPEGSLEIGRRSRGTPRIANRLLKRVRDFSQVNGH
SVISRDVAQRALRMEGIDDRGLNRIDRRFIETIRVVYNGGPVGIEAMAATLQMDPDTLID
VVEPYLLKEGYLARTPAGRRLTASGWEIATEG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
ttggaacccaatgaagccgatcttctgactccggaagagtttccggaggagattcccgac
gcgaacctcttgcgaccgcggaccttcgaccattatgtcgggcagaaggacgtgatcgac
agtctgaaagtggccattcaggccgctcttctccgggaggacacgctggaccacatcctt
ttgcacggtcctccgggtctggggaaaaccaccctcgccgctctggtcgcacgggccatg
ggagtctccttcctggcttcctccggaccagcgctcgaaaaagggggagatctggtcgga
atcctgacgagactcgccccgggcaccctcctttttatcgatgaaattcaccggcttccg
cgtcccgtggaggaaatcctctactccgccatggaggacttttcgatcgacgtcgttttc
gaccggggagccgccgcgcgcacctttcgccaccggatcccgccgttcaccctggtggga
gcaaccacccgcgccggcctcctctccgctcccctgcgggaccgcttcggcatccagaga
gatctcgacttttaccagccaccggaactggcccggatcctggaacgttccgcggggatc
ctcgggatcggaatcgacccggaaggttcgctcgaaatcgggagacggtcgcggggcaca
ccccgtatcgccaatcgtctgttaaagcgcgtccgggacttttcccaggtgaacgggcat
tctgtcatctcccgggatgtcgcccagcgggcattgcggatggaaggtatcgacgaccgc
gggctgaaccgcatcgaccggcgttttatcgaaaccatccgggtcgtgtacaacggcggc
cccgtggggatcgaagccatggcagccaccctgcagatggatccggacacgctgatcgac
gtggtggaaccgtatctcctgaaggaagggtatctcgcacggacacctgccggacggcgt
ctgacggcctccggatgggaaatcgcgacagagggatag
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