Leptospirillum ferriphilum ML-04: LFML04_0377
Help
Entry
LFML04_0377 CDS
T02319
Name
(GenBank) exinuclease ABC B subunit, UvrB
KO
K03702
excinuclease ABC subunit B
Organism
lfi
Leptospirillum ferriphilum ML-04
Pathway
lfi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LFML04_0377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfi03400
]
LFML04_0377
DNA repair and recombination proteins [BR:
lfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LFML04_0377
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LFML04_0377
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
DEAD
UVR
UB2H
AAA_22
AAA_30
Kinesin
DUF87
Microtub_bd
Cas3-like_C_2
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
AFS52619
UniProt:
J9Z849
LinkDB
All DBs
Position
345169..347274
Genome browser
AA seq
701 aa
AA seq
DB search
MKESPSGLSADRGNAPSPDSFAHTFRLAAGFSPSGDQERAIDVLSEGVLAGKTHQTLLGV
TGSGKTFTMANVIQRVQKPSLILAPNKTLAAQLYREFKAFFPDNRVEYFVSYYDYYQPEA
YIPSTDTYIEKDSAVNDLIDRMRHAATSSLLERRDTIVVASVSCIYGLGSPESYQKMHLY
LERGQTLTREKLIERLVTIQYQRNDIELSRGTFRVRGDVVDIIPASYEDRAIRVELFGDE
IERIREMDPLTGHELAVIPSVIIYPGTHYVLPPDELDRAMAGIEEELHARIREFRQSGKL
LEAQRIEQRTLFDLEMIKEIGYCHGIENYSRHLSGRKAGEPPPTLFDYFPDDFLVIVDES
HVAIPQVGGMYHGDYSRKKSLVEYGFRLPSAFDNRPLKFFEFEKTARQSLYVSATPGPYE
LRMSGGVTVEQIIRPTGLCDPEIEVVPATHQVDHLLGEIRTTVGQGDRVLVTTLTKKMAE
NLTEYLEERQVRVRYLHSEIDTLERMEILRDLRKGEFDVLVGINLLREGLDLPEVSLVAI
LDADKEGFLRSRRSLIQTAGRAARNVRGRVIFYGDKVTGSMEEAILETRRRREIQMAYNL
ERGITPRGIRKEIPESLYAVSEGDYVDVSLVEEVRGRLLEKEGDALPDGEIRKLMEKAAS
DLEFEKAAYYRDILRARGRDPDGKNLTVGKPGRRKKRSGPG
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagagcccgtccggattgtcggcggacaggggaaatgctccgtctccggattct
tttgcgcacacgttccggctggcggccggattttcgccgtccggggaccaggaacgggcg
atcgatgtgctctccgaaggggttctggccggaaaaacccatcagaccctcctgggagtc
accgggtccgggaagacgttcaccatggccaatgtcattcagcgggtccagaaaccctcc
ctgatcctggccccgaacaagactctggccgcccagctttaccgcgagttcaaggcgttt
tttcccgacaaccgggtcgagtattttgtcagctactacgactattaccagcccgaagcc
tacattccctccaccgacacctacatcgaaaaagattcggcggtcaacgacctgatcgac
cgcatgcgccatgccgcaacatcctctcttctggagaggcgggacacgatcgtggtggcg
tcggtgtcctgcatttatggccttgggtctccggagtcctaccagaagatgcacctctac
ctggagagagggcagaccctgacacgggaaaaactcatcgagcgtctggtgacgatccag
taccagcgcaacgacatcgaattgtcccgggggacgtttcgcgtccggggagatgtcgtg
gacatcattccggcgtcctacgaagaccgggcgatccgggtggagctgttcggagatgaa
atcgagcggattcgggagatggatccgctgaccggccacgaactggccgtcattccgtct
gtcattatttaccccggaacgcattatgtcctcccgcccgacgaactcgaccgggcgatg
gccggcatcgaagaggagcttcacgcccgaatccgcgagttccggcagtccggaaaactt
ctggaggcccagcgtatcgagcagagaaccctctttgatctcgaaatgatcaaggaaatc
ggatactgccatggcatcgagaattactcccgccatctgtccggccgcaaggcgggagag
cctcccccgacgctttttgattattttccggacgatttcctggtgatcgtcgacgaaagt
catgtcgccatcccccaggtgggtggcatgtaccatggggactattcccgaaaaaaaagt
ctggtggaatatggtttccggcttccctccgcgttcgacaaccgtcccctcaagtttttc
gaattcgaaaagacggcacggcagtccctgtatgtttcggcgacacccggtccctacgag
ctccggatgtcaggcggggtgacggtggagcagatcattcgcccgaccggcctgtgcgac
ccggaaatcgaagtggttcccgccacccaccaggtggatcatctgctgggggaaatccgg
accacggtagggcagggggaccgtgtcctggtcaccacgctgacaaagaagatggcggaa
aacctgaccgaatatctggaggagcgacaggtccgcgtccggtatctgcattccgaaatc
gatacgctcgaacggatggaaatccttcgggatctccgcaagggcgagtttgacgtcctc
gtggggattaacctgctccgggaaggtctggacttgccggaagtgtctcttgtggcgatt
ctggatgccgacaaggaagggttcctccgctccaggaggtccctgatccagacggcgggg
cgggccgcccggaatgtgcggggacgtgtcatcttctatggggacaaggtcaccggatcg
atggaggaggcgattctggaaacccggcggcgccgcgagatccagatggcctacaatctg
gaacgggggattacaccccgcgggatcaggaaagagattccggagagcctgtatgcggtt
tcggaaggagattatgttgatgtctcgcttgtggaagaggtgcgcggtcgcctcctggaa
aaagagggagacgccctgccggatggcgaaatccggaaattgatggagaaagccgcttcg
gacctggagttcgaaaaggccgcctattaccgggatatcctccgcgcccggggaagggat
ccggacggaaaaaacctgacggtcggaaagccgggccggcggaaaaaacggtccggtcca
ggctga
DBGET
integrated database retrieval system
