Leptospirillum ferriphilum ML-04: LFML04_0724
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Entry
LFML04_0724 CDS
T02319
Name
(GenBank) dTDP-D-glucose 4,6-dehydratase(rfbB)
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lfi
Leptospirillum ferriphilum ML-04
Pathway
lfi00521
Streptomycin biosynthesis
lfi00523
Polyketide sugar unit biosynthesis
lfi00525
Acarbose and validamycin biosynthesis
lfi00541
Biosynthesis of various nucleotide sugars
lfi01100
Metabolic pathways
lfi01110
Biosynthesis of secondary metabolites
lfi01250
Biosynthesis of nucleotide sugars
Module
lfi_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LFML04_0724
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LFML04_0724
01055 Biosynthesis of vancomycin group antibiotics
LFML04_0724
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LFML04_0724
00525 Acarbose and validamycin biosynthesis
LFML04_0724
Enzymes [BR:
lfi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LFML04_0724
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
AFS52958
UniProt:
J9ZAN8
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Position
644075..645256
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AA seq
393 aa
AA seq
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MIFLGFLSWNPYPNTGSPICVRGMDRGAGNRRTSISMERWLVTGGAGFIGSNFILAARRE
KRAEILNLDRLTYAGNTANLESLESDPGYRLLPGDIADRDLVRKALADFSPAAVFHFAAE
SHVDRSIEGPAIFLRTNVEGTFSLLEESRRYFDALPSNEKGRFRFLHVSTDEVFGSLSPS
DPPFNERTPYAPNSPYAASKAASDHFVRAWFHTYGLPVLTTNCSNNYGPFQFPEKLVPTA
ILSALKGKDVPVYGDGMNIRDWLFVEDHCQALFRVHERGVPGETYNVGGGNERTNLQMVS
ALLTLLDKKRPRPDGLSHLERIRFVPDRPGHDRRYAIDGSRLRRELSWTPAHAFDQALEK
TVDWYLDNEAWWKALASRHEAGTRQGLIAGGRP
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgatttttcttggatttttatcctggaatccctatcctaacacaggatccccgatttgt
gtcagggggatggacaggggagcggggaatcggaggacatcgatcagcatggaacggtgg
cttgtgacggggggagccggctttatcggctcaaatttcattctggctgcgcgacgggaa
aagcgcgcggaaattctgaatctggaccgtctgacctacgcggggaacacggcgaacctg
gagagcctcgaatcggacccggggtatcgtctcctcccgggggatatcgccgaccgggac
cttgtccgaaaggccctggccgacttttccccggccgccgtgtttcacttcgcggcggag
agtcatgtggaccggtccatcgaggggcctgccatttttttgaggaccaacgtggaagga
accttttccctcctcgaagagtcgcgccgctatttcgatgcccttccgtcgaacgaaaaa
ggacgcttccggttcctgcatgtgtcgacggacgaggtgttcggctccctttccccgtcc
gaccctccgttcaacgaaaggaccccgtatgccccgaattcgccctacgccgcttcaaaa
gccgccagcgaccactttgtccgggcatggttccacacctacggtcttccggttctgacg
accaactgctccaataactacggtccgttccagtttccggaaaaactcgttcccaccgcg
atcctctctgccctcaagggaaaggatgttccggtctacggcgacggcatgaatatccgg
gactggctctttgtcgaagaccactgccaggctctcttccgtgtgcatgaacggggggtg
cccggagagacctacaacgtcggagggggaaacgaaaggaccaatcttcagatggtatcc
gcccttctgacgcttctggacaaaaaaagaccccgtccggacggtttgtcccatctggag
agaatccggttcgttccggaccgtccgggacatgaccggagatatgcgatcgacggttcc
cgccttcgtcgggagctgtcctggacacctgcccatgcattcgaccaggcgctggaaaaa
accgtcgactggtatctcgacaacgaggcctggtggaaggctctcgcgtctcgccacgag
gcggggacacgacaaggcctgattgcgggggggcggccgtga
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