Leptospirillum ferriphilum ML-04: LFML04_0897
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Entry
LFML04_0897 CDS
T02319
Name
(GenBank) apurinic endonuclease
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
lfi
Leptospirillum ferriphilum ML-04
Pathway
lfi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LFML04_0897
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfi03400
]
LFML04_0897
Enzymes [BR:
lfi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LFML04_0897
DNA repair and recombination proteins [BR:
lfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LFML04_0897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AFS53129
UniProt:
J9Z9E6
LinkDB
All DBs
Position
831140..832075
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AA seq
311 aa
AA seq
DB search
MTRTTPRSLFLGTHVSIRGGLALSIERGETLGCGSIQIFSHSSRTWAVPALTEAEVNAFV
SRHQKSSVGPVLMHASYLVNTATSDPEKRKKSAAALEEDWILANRLGVYGLVLHPGSAAG
QSDALAIRLSAEMIRDTVDREKGGSTLLLLENTAGGGRTLGRDPGTMKQLVDRVDRPEKV
GLCLDSCHLLASGAEIRNPRSYEEVLSAWTEAAGPGGIRAWHLNDALFERGSGRDRHAHI
GKGAIGLWFFWTLLRDHRFTGIPMVLETPKTDDIREDRLNLGILERLSRQETFWPEDPEI
VDCLAELETVA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgacccggacaacccctcgttctctttttctcggaacgcatgtctccatccggggaggg
ctcgccttgtcgatcgagcgcggagaaaccctggggtgcggatcgattcagatcttttcc
cattcctcccggacctgggctgttcccgcccttacagaagcagaggtcaacgcgtttgtc
tcccgtcatcaaaaatcgtcggtgggtcccgttctgatgcatgcaagctaccttgtcaac
acggcgacctccgacccggagaagaggaaaaaatccgccgccgctcttgaggaggactgg
atccttgcgaatcgcctgggagtctatggccttgtccttcatcccggatctgcggcgggg
caatcggacgctctggccatccgtctttcggcagaaatgatccgggacaccgttgatagg
gaaaaaggggggagcaccctgcttttgcttgaaaacacggcgggtggaggacggacactg
ggacgggatcccgggacgatgaagcaacttgtcgaccgggtcgacagaccggaaaaggtc
gggctttgtctggattcctgccatctccttgcttcaggagccgaaatccggaatccgcgc
tcctacgaggaggttctctcggcctggacagaggccgccggcccggggggaatccgggcg
tggcatctgaacgatgcccttttcgaacggggatccggacgggaccggcatgcgcacatc
ggaaaaggggccattggtctgtggtttttctggacccttttgcgagaccaccgctttaca
ggaataccgatggttctggaaaccccgaagacggacgatatccgggaagaccgtctgaac
ctcggcatcctcgagagactgtcccgtcaggagaccttttggccggaagaccccgaaatc
gtcgactgtctggcggagctggagacagtcgcctga
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