Leptospirillum ferriphilum ML-04: LFML04_1060
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Entry
LFML04_1060 CDS
T02319
Name
(GenBank) putative pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lfi
Leptospirillum ferriphilum ML-04
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfi03016
]
LFML04_1060
Enzymes [BR:
lfi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LFML04_1060
Transfer RNA biogenesis [BR:
lfi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LFML04_1060
Prokaryotic type
LFML04_1060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
DKCLD
Motif
Other DBs
NCBI-ProteinID:
AFS53290
UniProt:
J9Z9X4
LinkDB
All DBs
Position
1001307..1002284
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AA seq
325 aa
AA seq
DB search
MNPLSISPRTERTSGMFLVDKPAGMTSHDVVDSVRKNLGFIRVGHGGTLDPMATGVLPVF
VGKSTRLAEMIHGYDKTYRFDVRFGVTTDTGDSEGKPLTEIKFDQLDRSKLKNLLQSFTG
VRLQKPPMYSAVKKNGTPLYRLARKGIEIEREARRIEVYSLEMLTVFPDGKTASFRVKCS
KGTFVRTIAEEIGEAMGLGGHVVFLRREEFGHFRAEDAVSLEDLISMDMDEGLSSCLWSP
SRILESFPEIRILDAHLPDIHRGARIPAFQIYRTSGLFNLSEMVRISDRKGKCIAVGKTS
VSSVELDRLPKGLPVAQVDKLIDWL
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtgaatccactgtcaatcagcccccggaccgaacgaacatcgggtatgtttcttgtggac
aagcccgccggcatgacatcgcatgatgtggtcgacagtgttcgtaaaaatcttggattt
atccgtgtcggacatggtggaacacttgatccaatggcgacgggtgtccttcccgttttt
gtcgggaaatccacgcgactggcagaaatgattcatggatatgacaaaacataccggttc
gacgttcgatttggtgtcacgacggatacgggggattcggagggaaagcctctgactgaa
atcaagtttgatcaactggacaggagcaagctcaagaatctgctccagtcttttacaggt
gtgagactccaaaagccgcccatgtattcggcagtcaagaaaaatggaactcctctttat
cgacttgcaagaaaagggattgaaatagagagagaagcccgtcgaattgaagtttactcc
ttggaaatgttgaccgtttttccggacggaaagactgcttcttttcgggtgaagtgttca
aagggaaccttcgtccggacgattgcagaagaaatcggagaggcgatggggttaggtgga
cacgtcgtattcttgcgccgggaagagttcggtcattttcgtgctgaggatgctgtttcc
cttgaagacttgatttccatggacatggacgagggtctttcctcttgtttgtggagtccc
tccagaatcctcgagagttttcctgaaatccggattttagatgcacatttaccggatatt
catcgaggagccaggatcccggcttttcagatttatcggacgagtggattgtttaatttg
tcagaaatggttagaatatctgatcgtaaaggcaaatgtatcgcagtggggaagacttcc
gtgtcaagcgtggagctcgacaggcttccaaaaggtttgcccgttgcccaggtcgataag
ttgatcgactggctctga
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