Leptospirillum ferriphilum ML-04: LFML04_1106
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Entry
LFML04_1106 CDS
T02319
Symbol
groL
Name
(GenBank) chaperonin GroEL, truncated
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
lfi
Leptospirillum ferriphilum ML-04
Pathway
lfi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LFML04_1106 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfi03019
]
LFML04_1106 (groL)
03110 Chaperones and folding catalysts [BR:
lfi03110
]
LFML04_1106 (groL)
03029 Mitochondrial biogenesis [BR:
lfi03029
]
LFML04_1106 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lfi04147
]
LFML04_1106 (groL)
Enzymes [BR:
lfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
LFML04_1106 (groL)
Messenger RNA biogenesis [BR:
lfi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LFML04_1106 (groL)
Chaperones and folding catalysts [BR:
lfi03110
]
Heat shock proteins
HSP60 / Chaperonin
LFML04_1106 (groL)
Mitochondrial biogenesis [BR:
lfi03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
LFML04_1106 (groL)
Exosome [BR:
lfi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
LFML04_1106 (groL)
Exosomal proteins of other body fluids (saliva and urine)
LFML04_1106 (groL)
Exosomal proteins of breast cancer cells
LFML04_1106 (groL)
Exosomal proteins of colorectal cancer cells
LFML04_1106 (groL)
Exosomal proteins of bladder cancer cells
LFML04_1106 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
SurA_N
Motif
Other DBs
NCBI-ProteinID:
AFS53336
UniProt:
J9ZB44
LinkDB
All DBs
Position
1045379..1047004
Genome browser
AA seq
541 aa
AA seq
DB search
MAKQMSYSESARASILKGVTALADAVKVTLGPKGRNAVIEKKFGAPTITKDGVTVAKEIE
LKDPYENMGAQLVKEVASKTSDIAGDGTTTATVLAHAIYREGVKNVSAGSNSMELKRGID
LAVTSIINELKKMSKPCQDKKEIAQIATISANNDAEIGRLIADAMDKVGKDGVITVEEAK
SMTTSLDVVEGMQFDRGYISPYFVTDQERMEVILDNPYILIHEKKVSSMKDLLPILEQTA
KMGKPILIIAEEVEGEALATLVVNKLRGTLQVAAVKAPGFGDRRKAMLEDIAILTGGQMI
AEDLGLKLENLKLSDLGRAKRVSIDKDNTTIVEGAGEHAKIQARVKQIKAQIEESTSDYD
REKLQERLAKIVGGVAVINVGAATETEMKEKKARVEDALHATKAAVEEGIVPGGGVTLLR
SSAVLDTLKVEGDQKVGVNIIRRALEEPLRQIAQNAGLEGSVVVQKVKAEKGTMGFDAAT
ETYVDMIQAGIIDPTKVTRSALQNAASVASLMLTTEVMIADIPEKEPKAPAMPGGGMGDM
Y
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcagatgagctacagtgaaagtgccagagcttcaatcctgaaaggtgtgact
gcccttgcagatgcagtaaaagtgaccctcggccccaaaggtcgcaacgctgttatcgag
aaaaagttcggagctccgacaatcaccaaagacggtgtcacggtggccaaggagatcgag
ctgaaagatccttatgaaaacatgggtgcccagcttgtcaaggaagtcgcttccaagacg
agcgacatcgccggtgatggaacaacgactgctacggtgctggcacacgcgatctatcgt
gaaggtgtcaagaatgtttccgccggttcaaactccatggagttgaagcggggtatcgat
ttggccgtgacctccatcatcaacgagctgaaaaagatgagcaagccttgccaggacaaa
aaggaaattgcccagattgcaaccatttcagccaataatgatgcggaaattggacgattg
attgcagatgcgatggacaaggttggcaaggatggggtcattacggtcgaggaagcaaaa
agcatgacgacttccttggatgttgtcgaagggatgcagttcgatcgtggctatatttct
ccctatttcgttaccgatcaggagaggatggaagttattctcgacaatccctacattctg
attcatgagaagaaagtcagcagcatgaaggaccttcttccgattctcgagcagacagca
aaaatgggcaagcccattctcattattgccgaggaagttgaaggagaagcactggcaacg
ctcgttgtcaacaaacttcggggaactctgcaggtggctgcggtcaaggctcccggattt
ggcgatcgccggaaggcaatgcttgaagatatcgctattctgacgggtggtcagatgatt
gctgaagatctcggcctgaagcttgaaaatctcaagctctctgatctcggacgcgcaaaa
cgtgtcagcatcgataaagacaacacgacgattgttgaaggtgctggagaacacgccaag
atccaggctcgtgtgaaacagatcaaggctcagattgaagagtcgacttctgattacgat
cgggagaagctgcaggaaagactcgcaaagatcgttggcggagtcgccgtgatcaacgtg
ggtgctgcaactgaaacggaaatgaaggagaagaaagcacgcgtcgaagatgccctccat
gctacgaaagcggccgtggaagaagggatcgttcccggaggcggggtgacattgctccgg
agttctgcagtccttgacaccctgaaagtcgaaggcgaccagaaggtcggagtcaacatc
attcggcgggctcttgaagaacctttgcgccagatcgcacagaatgcgggactcgaaggt
tcggttgtggtccagaaggtcaaggcagaaaaaggaacaatgggttttgatgctgcgaca
gagacctatgtggacatgatccaggctggtatcatcgacccgacgaaagtcacccggtct
gctcttcagaatgctgcttccgtggcatctctgatgctgaccactgaggtgatgatcgcg
gatattccggagaaggagccgaaggcccctgcaatgccgggcggtggtatgggagatatg
tattaa
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