Leptospirillum ferriphilum ML-04: LFML04_1570
Help
Entry
LFML04_1570 CDS
T02319
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit/40 kD subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lfi
Leptospirillum ferriphilum ML-04
Pathway
lfi03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LFML04_1570 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfi03021
]
LFML04_1570 (rpoA)
03400 DNA repair and recombination proteins [BR:
lfi03400
]
LFML04_1570 (rpoA)
Enzymes [BR:
lfi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LFML04_1570 (rpoA)
Transcription machinery [BR:
lfi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LFML04_1570 (rpoA)
DNA repair and recombination proteins [BR:
lfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LFML04_1570 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AFS53780
UniProt:
J9ZBA1
LinkDB
All DBs
Position
complement(1498742..1499716)
Genome browser
AA seq
324 aa
AA seq
DB search
MNSVRDFQMPKSLSFDRDTQTDRFLRVIAEPFERGYGTTLGNSLRRILLSSIKGAAITAV
RFRGVFHEFSNIPGVLEDVSDIILNLKEVRVKSHEPEPHWVHLKVSGQKYVTAGDISTGG
VIDILDPGHHIATLDKGASLEMDLRIETGRGYVSAERNKTESLEVGVIPIDAVFTPLKKV
NFTVDSTRVGRMTDYDKLTLDIETDGSLTPEEALSQAAQILKDHLDMFVIEDTDHLIPDS
PKPTMKVEEIGDDLLTRNVLDLELSVRASNCLKNAEIKTVGDLIQKTENELLKTKNFGRK
SLNEIKTVLSNMGLTLGMELTNKD
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtgttcgggactttcagatgccaaagtccttgagttttgatcgggatacccaa
acagacaggttcctcagggtcattgcagaaccttttgaaagaggatacggaacaacattg
ggaaactccttacggagaatcctcctttcttctatcaagggagctgcgattacagctgtt
cgctttcgaggggtttttcatgagttttccaatatccccggtgtcttagaggatgtttcg
gatattatcctgaatttgaaggaagtgcgggtaaaatctcatgaacctgagccccattgg
gttcatcttaaggtttctggccaaaaatatgttacagctggagatatttccactggtgga
gttatagacatattagatcctgggcatcatattgctacgcttgataaaggtgcatctctc
gagatggatctccgtatcgaaactggtcggggatatgtttcagccgaaaggaataaaacg
gagtctcttgaggttggtgtcattccaattgatgcggtttttacacctttaaaaaaagtg
aactttacagtcgacagtacgcgcgtcggacgaatgacagattatgacaagttgactctt
gatattgaaacggatgggagtctcacaccagaagaagctctgtctcaggcggctcaaatt
ttaaaagatcatctggatatgtttgttattgaagatacagatcatctcatcccggactct
cccaagcctacaatgaaggtggaagaaattggggatgatctgttgacccgaaatgttctt
gatcttgagctttctgtacgagcatccaattgtctcaaaaatgctgagatcaagaccgtt
ggcgatcttatccaaaagacagaaaatgaactccttaagacgaaaaactttggtcgtaaa
tccctcaatgaaataaagaccgttctttcgaacatgggattgaccttagggatggagttg
accaataaggattaa
DBGET
integrated database retrieval system