KEGG   Leptospirillum ferriphilum ML-04: LFML04_1570
Entry
LFML04_1570       CDS       T02319                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit/40 kD subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
lfi  Leptospirillum ferriphilum ML-04
Pathway
lfi03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lfi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LFML04_1570 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lfi03021]
    LFML04_1570 (rpoA)
   03400 DNA repair and recombination proteins [BR:lfi03400]
    LFML04_1570 (rpoA)
Enzymes [BR:lfi01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LFML04_1570 (rpoA)
Transcription machinery [BR:lfi03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     LFML04_1570 (rpoA)
DNA repair and recombination proteins [BR:lfi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      LFML04_1570 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2 RAD51D_N
Other DBs
NCBI-ProteinID: AFS53780
UniProt: J9ZBA1
LinkDB
Position
complement(1498742..1499716)
AA seq 324 aa
MNSVRDFQMPKSLSFDRDTQTDRFLRVIAEPFERGYGTTLGNSLRRILLSSIKGAAITAV
RFRGVFHEFSNIPGVLEDVSDIILNLKEVRVKSHEPEPHWVHLKVSGQKYVTAGDISTGG
VIDILDPGHHIATLDKGASLEMDLRIETGRGYVSAERNKTESLEVGVIPIDAVFTPLKKV
NFTVDSTRVGRMTDYDKLTLDIETDGSLTPEEALSQAAQILKDHLDMFVIEDTDHLIPDS
PKPTMKVEEIGDDLLTRNVLDLELSVRASNCLKNAEIKTVGDLIQKTENELLKTKNFGRK
SLNEIKTVLSNMGLTLGMELTNKD
NT seq 975 nt   +upstreamnt  +downstreamnt
atgaacagtgttcgggactttcagatgccaaagtccttgagttttgatcgggatacccaa
acagacaggttcctcagggtcattgcagaaccttttgaaagaggatacggaacaacattg
ggaaactccttacggagaatcctcctttcttctatcaagggagctgcgattacagctgtt
cgctttcgaggggtttttcatgagttttccaatatccccggtgtcttagaggatgtttcg
gatattatcctgaatttgaaggaagtgcgggtaaaatctcatgaacctgagccccattgg
gttcatcttaaggtttctggccaaaaatatgttacagctggagatatttccactggtgga
gttatagacatattagatcctgggcatcatattgctacgcttgataaaggtgcatctctc
gagatggatctccgtatcgaaactggtcggggatatgtttcagccgaaaggaataaaacg
gagtctcttgaggttggtgtcattccaattgatgcggtttttacacctttaaaaaaagtg
aactttacagtcgacagtacgcgcgtcggacgaatgacagattatgacaagttgactctt
gatattgaaacggatgggagtctcacaccagaagaagctctgtctcaggcggctcaaatt
ttaaaagatcatctggatatgtttgttattgaagatacagatcatctcatcccggactct
cccaagcctacaatgaaggtggaagaaattggggatgatctgttgacccgaaatgttctt
gatcttgagctttctgtacgagcatccaattgtctcaaaaatgctgagatcaagaccgtt
ggcgatcttatccaaaagacagaaaatgaactccttaagacgaaaaactttggtcgtaaa
tccctcaatgaaataaagaccgttctttcgaacatgggattgaccttagggatggagttg
accaataaggattaa

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