Leptospirillum ferriphilum ML-04: LFML04_1895
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Entry
LFML04_1895 CDS
T02319
Name
(GenBank) pseudouridine synthase, Rsu
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
lfi
Leptospirillum ferriphilum ML-04
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lfi03009
]
LFML04_1895
Enzymes [BR:
lfi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LFML04_1895
Ribosome biogenesis [BR:
lfi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LFML04_1895
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AFS54095
UniProt:
J9ZC11
LinkDB
All DBs
Position
1800891..1802615
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AA seq
574 aa
AA seq
DB search
MEHSTLNTTFKPDEDGLIRLQKLLAHRGLASRRNAEEMIRGGLVKVNGIVVTVPGTKVHP
ETDRVTVDGKTVPVEPEPFLFLFYKPKGIVSTLHDPDGKTTLKDFFPQINPLIHVGRLDI
QSEGVLLLTNNGDLAQRILHPRYEIPRTYLVKVQGVVKPEHLDRIRSGKVRLDGRPVQPL
ELEQERLTETNSWYRITLTEGRNREVRRLFDALHYFVLKLTRIAFGNLDLAGLEPGEYRL
VTPEEIDLLLSGARWKRKESIPPPERSPRKPNPATPSSPDFRRHSFRSRTTSPDRTFSGP
ADGDQEEDPFPRQTGQGHRSRPDTRSRGLSQSDSERFFNGRPRHRSDNKQQSGPSSQKRR
GPHSGNRTDRGRTSLSGGNPDHRSSGRREPAEKESFFRRDRRVSSGPSFRREVNRNSGPA
DDAPRYRKNPREDRPRSSRNTRENHPSSPPPRREDERNSRYAEDAPRHRKNPREDRPRSF
RNTRENHPSSPSPRREDERNSRYAGNLSQNKKRQEETFREPSPRGSTAFRKRSGEFSGTG
HKPANRELSSGQPGKPGSTPRGRKGPDKNHPHHT
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggagcactcgactttgaacaccacctttaagccggacgaggatggactcatccggctt
cagaagctcctggcccatcgtggactggcttcacgcagaaatgcggaagaaatgatccgg
ggagggctggtgaaagtgaacggcatcgtcgtaacggtccctggaacaaaggttcacccg
gaaacagaccgtgtcaccgtcgacggaaaaaccgttcccgtcgagccggaaccctttctt
tttcttttctacaaaccaaaggggatcgtgtcgacgctgcatgatccggatggaaaaacg
actctcaaggacttttttccgcaaatcaatcccttgatccatgtcgggcgactggatatc
cagtcggaaggggttctcctcctgacaaacaacggggacctcgcccaacgcattctccat
ccccgctacgaaatcccccggacctaccttgtgaaggtccagggagtcgtcaaaccggag
catctcgaccggatccgttccggaaaagtccgtctggatggacgtcctgtccagccgctg
gaactggaacaagaacgtctgaccgagacaaactcctggtatcggattaccttgaccgaa
ggccgaaaccgcgaagtccgcagacttttcgacgcgttgcattatttcgtcctgaagctg
acccgaatcgcattcgggaatctggatcttgccggactggaaccaggtgagtaccgtctg
gtgactcctgaagagattgatctccttctttcaggggcaaggtggaaaaggaaggaatcc
attcctcctccggagaggtctccccgaaagcccaatcctgcgacgccctcttccccggac
ttcagacgccattcgtttcgatcccggaccacttctccggacagaaccttttcgggacct
gccgatggagaccaggaggaggatccttttccgaggcagaccggacaggggcacagatcc
cggcccgacacccgatcccgtggtctttctcaatcggactcggagaggttttttaacggc
cggcctcgtcaccgttccgataacaaacaacagtctggcccgtcttctcagaaaagacga
ggtccacattccggaaaccggacggacagagggaggaccagtctcagcggcggcaacccg
gatcatcggtcctccggacgaagggagcccgcagaaaaagaatccttctttcggagggac
agacgggtctcttccggaccgtccttccggagggaagtcaaccggaactccggacctgcc
gacgatgctccgcgctacagaaaaaacccgcgggaggacagaccccgttcttccaggaac
acccgggaaaaccatccgtcctcccctcctccccgcagggaggacgaacggaactcccga
tatgccgaggatgctccgcgacacagaaaaaacccgcgggaggacagaccccgttctttc
aggaacacccgggaaaaccatccgtcctctccttctccccgcagggaggacgaacggaac
tcccgatatgccgggaatctctctcagaataaaaagcgacaggaagaaacctttcgggaa
ccatcgccccgcggatcgaccgctttccggaaaagatccggagaattctcagggacagga
cataaacccgccaacagagaattgtcttccggacaacccggaaaaccgggctcgactcct
cgcggccgaaaaggtcccgacaaaaaccatccccaccacacttaa
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