Leptospirillum ferriphilum ML-04: LFML04_2009
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Entry
LFML04_2009 CDS
T02319
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lfi
Leptospirillum ferriphilum ML-04
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfi03400
]
LFML04_2009 (phr)
Enzymes [BR:
lfi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
LFML04_2009 (phr)
DNA repair and recombination proteins [BR:
lfi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
LFML04_2009 (phr)
Prokaryotic type
LFML04_2009 (phr)
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFS54207
UniProt:
J9ZF04
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Position
1906369..1908099
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AA seq
576 aa
AA seq
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MCSLAEEWQQEKRNISKIRDHPRDGRFLNLLRQDSTSFPRSVLTSDVSADVSESPYTPPF
IRPFPKRGSPFPPLPERWTNASILETIVSVFPEAPTKTEAHISSIVWFRNNLRLLDNPPL
REAAERGPLLPVFVGEHPGKQPPEGARQWWQARSLKRLDHSLSRRGAPLLFLRGDPATLL
PDLATRLKADKILAMEAIDPDGRRTQSRLQGALSGKPVELHLFPAGYLISPADLPAERRS
PWKVFTPFWQRAQSHLPPPLPLPAPDRLDGIPFPRTETPDDWGWEPENPDWATEMRGFWD
PGEEGAWRRLHAFLEKRLENYRVRRDFLEEDTSSLLSPHLANGEISIRSVWWAIKESTAP
DKDREKFLSELGWREFSAHLMWHHPDLASERLHKERPEIRWREDPFSLLAWQKGRTGIPL
VDAGMRQLRRLGFLPNRVRMVAASFLVKNLLIDWRKGREWFADNLVDHDPANNAASWQWI
SGYGADAAPWFRIFNPVLQGEKFDPEGRYVKTYLPELHGLSPRYIHCPWTAPAALLDSAG
IGEQSPYRNPIVDLGLSRKRALQAWGSGTLPQESLS
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctcttgcggaagaatggcagcaagaaaagagaaacatctccaaaatccgcgat
catcctcgtgatgggcgttttctgaatcttctccgccaggattcgacttcgtttccccga
tcggttttgacatcggatgtttcagcagatgtttcagaatcgccgtatactccccctttc
atccgtccgttcccgaaaagaggatctccattcccgcctcttccagagagatggacgaac
gcttcgattttggagacaatcgtttccgtattccctgaagcacccacgaaaacggaggcc
cacatttcctcgatcgtctggttcagaaacaaccttcgccttttggacaacccgccactc
cgtgaagcggccgaacggggtccgctcttgcctgtgttcgtcggggaacaccccggcaaa
cagcctccggaaggcgcgcgccaatggtggcaggcaagaagtctcaaacgtcttgatcat
tccctttcccggcggggggctccgctcctctttcttcggggggatccggccaccctcctc
ccggatctcgcgacacgcctgaaagccgataaaatccttgccatggaagccatcgatccc
gacggccgacggacacaatcccgtcttcagggcgccctgtccggaaaaccggtggagctt
cacctttttcccgcaggctatctgatctctcccgccgatctcccggccgagcgaaggtct
ccctggaaagttttcacaccgttctggcaaagagcccagtcgcaccttccccctcccttg
ccgcttccggcgccggaccgtctggacggcatcccttttccccgaacggaaaccccggac
gattgggggtgggaaccggaaaatccggactgggcgacggaaatgcggggtttctgggat
cccggggaagaaggggcctggagacggctgcacgcgttcctcgaaaagcgcctggagaac
tatagagtacggagggactttctggaggaagacacctcctcgcttctttcgcctcatctc
gcaaacggggaaatcagcattcgttccgtctggtgggcgatcaaagagtccacggcgccg
gacaaggaccgtgaaaaatttctgagcgagctcggctggagggagttttcggcccatctg
atgtggcaccacccggatcttgcctccgaacgcctccacaaagagcgtccggaaatccgg
tggagagaggacccgttttcactgttggcctggcaaaaaggacgaacgggcattcctctg
gttgatgccgggatgcgtcagctccggcgcctgggatttctcccaaaccgggtccggatg
gtcgccgcgagctttctcgtgaagaaccttctgattgactggagaaaaggaagagagtgg
tttgccgacaatctggtcgaccacgatccggccaacaatgccgcatcatggcaatggatc
tccggttatggggcggacgcggcgccctggttccggatcttcaatccggtcctgcaaggg
gaaaaattcgaccccgaagggcgttacgtcaaaacatacctgccggaacttcacgggctc
tccccgcgctatatccattgcccctggacagccccggccgctcttctggacagcgccggg
atcggagaacagtccccctaccggaacccgatcgtcgatctcggtctgtcccgaaaaaga
gcgctgcaggcctggggctccgggacactcccgcaagagtctctctcctga
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