Leptospirillum ferriphilum ML-04: LFML04_2336
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Entry
LFML04_2336 CDS
T02319
Symbol
glyA
Name
(GenBank) glycine/serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
lfi
Leptospirillum ferriphilum ML-04
Pathway
lfi00260
Glycine, serine and threonine metabolism
lfi00460
Cyanoamino acid metabolism
lfi00630
Glyoxylate and dicarboxylate metabolism
lfi00670
One carbon pool by folate
lfi00680
Methane metabolism
lfi01100
Metabolic pathways
lfi01110
Biosynthesis of secondary metabolites
lfi01120
Microbial metabolism in diverse environments
lfi01200
Carbon metabolism
lfi01230
Biosynthesis of amino acids
lfi01240
Biosynthesis of cofactors
lfi04981
Folate transport and metabolism
Module
lfi_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LFML04_2336 (glyA)
09102 Energy metabolism
00680 Methane metabolism
LFML04_2336 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LFML04_2336 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LFML04_2336 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LFML04_2336 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LFML04_2336 (glyA)
Enzymes [BR:
lfi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LFML04_2336 (glyA)
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Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AFS54526
UniProt:
J9ZEC8
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All DBs
Position
2214406..2215650
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AA seq
414 aa
AA seq
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MSWLIQSDPEVHGAISEEIRREQEKLILIASENYVSRPILEAVGSVMTNKYAEGYPGRRY
YAGCEAVDQVETLAIERAKSLFGAEHANVQPHSGSQANMAVYLASINPGDTILGMNLAHG
GHLTHGSPVSFSGHYYKAVFYGVRKETGLIDYDQVESLARQHKPKIIIAGASAYPRIIDF
SFFRKVADEVGAHLLVDMAHFAGLVAAGMHPSPFPYADFVTTSTHKTLRGPRGGMAFCKE
QWAKPLDKGVFPMMQGGPLMHVVAGKAVMLKEASMPSFKNYIARVLENARILSETLAAHG
YDILTGGTDNHLMLIDLRSKGLTGKEGEKLLSDTGIYCNKNAVPFDDKPPTVTSGIRLGT
PAITTRGFNADEIREVGEIIHRVLSGQGKEIVMKEAREAVKRLLDKHPIYTDLA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggctcatacaatcggaccctgaagtccatggagcaatttccgaagaaatccgg
cgggaacaggaaaaactcattctgatcgcctcggaaaattatgtgagccgacccattctg
gaagccgtcggatccgtgatgacaaacaaatacgctgagggctatccgggacgccgttat
tacgccggatgcgaagctgtcgaccaggtggaaaccctcgcaatcgaacgagccaagagt
ctcttcggcgcagaacatgcaaatgttcagcctcactccggatcccaggcaaacatggca
gtttatctcgcttcaatcaatcccggagataccattctgggaatgaacctggcgcacggt
ggacacctcactcacgggagtccggtctctttttccggacattactacaaagcggtgttt
tatggcgttcgcaaagagaccggtctgatcgactacgatcaggtcgaaagtcttgcccga
cagcacaaacccaagatcatcattgcaggggccagtgcctacccaaggatcattgacttt
tcgtttttccgaaaagttgccgatgaggttggcgcccatcttcttgtggacatggcgcat
tttgcgggtctcgtggcagccggaatgcacccttccccctttccctacgccgacttcgtc
acgacctccacacacaagacactccgcggaccacgcgggggaatggccttttgcaaggaa
cagtgggcaaaaccccttgataagggggtctttcccatgatgcagggaggtcctctcatg
catgtcgtggccggaaaagccgttatgctgaaagaagcctccatgccctccttcaagaat
tatattgctcgggttctggaaaatgcccgcattctctcggagacacttgccgcccacggg
tatgatatccttacgggaggaacagacaatcacctcatgctgatcgatcttcgctccaaa
ggactgacaggaaaagagggagaaaaactcctctcggacacgggaatctactgcaataaa
aatgctgtgcccttcgatgacaaaccccccactgttaccagcgggattcggctgggaacc
cctgccatcacgacaagagggttcaatgcggatgaaattcgtgaagtcggggagatcatc
catcgcgttctgtcaggccaaggcaaggagattgtgatgaaagaagcacgggaagccgtg
aaacgcctcctcgacaaacatcctatctatacggatctggcctga
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