Leptospirillum ferriphilum ML-04: LFML04_2338
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Entry
LFML04_2338 CDS
T02319
Symbol
priA
Name
(GenBank) primosomal protein N
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lfi
Leptospirillum ferriphilum ML-04
Pathway
lfi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LFML04_2338 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfi03400
]
LFML04_2338 (priA)
Enzymes [BR:
lfi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LFML04_2338 (priA)
DNA repair and recombination proteins [BR:
lfi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LFML04_2338 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_C
PriA_3primeBD
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
zf-CHY
AAA_30
Zn_ribbon_6
AAA_19
Viral_helicase1
PIF1
IBR_1
Motif
Other DBs
NCBI-ProteinID:
AFS54528
UniProt:
J9ZF12
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All DBs
Position
2216139..2218124
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AA seq
661 aa
AA seq
DB search
MKSVTIVPMTGLPEPFLTYSWTETDRTPIPGTRVRIPLGKREIVGFIWNATPPSPQKKLT
LKPVLEILDSYPVLPPCLHPIYEFSSWFYRLPLGLLLRNTLPQPLAKPLPLSSKIQQAAP
SPPSRATSDLPPMTDDQKQVFLEWEAKQADQFSITVLRGVTGSGKTRLYQEMAKHTFSRD
RQVLLLTPEIGLVPQLEEAFSGLVPRIGVIHSQITPMKRLSSWMSILRGEMSLVVGPRSA
FFSPLTHLGLIIVDEEHDSAYQAWEGLSFNVRNLALKYAQLRQIPVVLGSATPLAESLYY
AGSHRYTLLSLPRRIHGSSLPEITLTAPSRKEKIFPSSLLGEIDQTLKDGEQTVILLNRR
GYAPLLQCLTCKNVLMCKKCSVRLVLHKKPTRQLVCHLCASRFNPPDHCSECGGTFLSED
GLATQKAEDLLSFHFPNARVIRLDQDTRSREHSSRTPFSETEADILIGTQMIAKGHDFRR
VTLGIVLEMDQALSLPDYRSEERVFQLVLQLAGRVGRHRPGGRVHLVTAKPDLPLYQYLK
NYDQDGFIQHVLRERKAFGYPPFGRIALLTLSSKDEKTLLEIVSSLDRLWRAGHDTEGVS
LLGPVPAPVYKAKLYYRYQYLIKSSSIEKIHSAIDFFQKQLAPVRGAHVGWAVDPPDLLS
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgtaaccattgttccaatgacaggccttccggagccttttctgacgtactcc
tggacagaaacagaccggactccgattccaggaacgcgtgtccggatccctctcggaaaa
agagagatcgttggattcatctggaacgccaccccgccatctccccaaaaaaaattgacc
ctcaaaccagttctcgagatcctggactcgtatccggttcttcctccctgtctccatccg
atttatgagttctcctcctggttttaccgattgccgctcggactccttctccgaaatacc
ctgccccagccgctcgccaaacccttgcctctgtcctccaaaatccaacaagcagcccct
tctcctcccagccgtgcaacctccgacctcccacccatgaccgatgaccagaaacaagtc
tttctggaatgggaagccaaacaggcggaccaattttcaattaccgttttgagaggcgtt
acaggttcgggaaaaacccgtctatatcaggagatggccaaacacactttttcccgggat
cgtcaggtcctcctcctgacaccagaaatagggcttgttccgcagctcgaagaggcgttc
tccggacttgtcccccggattggagtcatccacagtcaaattactcccatgaaaagactt
tcctcatggatgtcgattctcaggggagagatgtctcttgtcgtcggtcccagatccgcc
tttttctctccactgacacatctgggactgattatcgtggacgaagagcatgattctgcc
tatcaagcgtgggaaggactctcctttaatgtccgcaaccttgccctgaaatatgcacag
cttcgtcaaatccctgtcgttctgggttctgctacaccgcttgcggaatctctctattac
gcagggtcccaccgttacaccctcctgagccttccccgaagaattcacggttcttccctt
cctgaaatcacactcactgcgccttcccgaaaagagaagatctttccctcttcccttctc
ggtgagatcgatcaaaccctgaaagacggggaacagacagttatcttgctgaacagacgt
ggttatgcccctcttctgcaatgcctcacatgcaagaatgtgctcatgtgcaagaagtgc
tctgtccgcctcgtcctccacaagaaacccacccgtcaactcgtctgtcatctttgcgca
tctcggttcaatccccccgatcattgttctgaatgtggcggaactttcctttcggaagat
gggctggcaacacaaaaagccgaagatttgctctcttttcattttccaaacgcccgtgtg
atccggctggaccaggacacccgctccagagagcactcatcaaggacacctttttccgaa
acggaggccgatatcctgatcggaacccaaatgatcgcgaaagggcatgactttcgtcgc
gtgaccctgggcattgtccttgaaatggatcaggctctctcgttgccagattaccggagc
gaggaaagagtttttcagctcgttctacaactggctggacgtgtcggaagacatagaccc
ggtggacgggttcatcttgtgaccgcgaaaccggatcttcccctttaccagtatttgaaa
aattatgaccaggacggatttatccagcatgtcctgagggagagaaaagcatttggttac
cctcccttcggcaggattgctcttctgactctgtcttcgaaagacgaaaagactcttttg
gagattgtgtcatcccttgatcgactctggagagccgggcatgacacggaaggagtgtcc
ctcctgggacctgtaccagcacctgtttacaaggcaaaactttattaccgctaccaatat
ctcatcaaaagctcttctatcgaaaagatccattctgccatcgattttttccagaaacag
cttgccccggtcagaggggctcatgtgggatgggcagtggatcctccggatcttctctct
ttttga
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