Leptospirillum ferriphilum ML-04: LFML04_2485
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Entry
LFML04_2485 CDS
T02319
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lfi
Leptospirillum ferriphilum ML-04
Pathway
lfi03030
DNA replication
lfi03430
Mismatch repair
lfi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LFML04_2485
03430 Mismatch repair
LFML04_2485
03440 Homologous recombination
LFML04_2485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfi03032
]
LFML04_2485
03400 DNA repair and recombination proteins [BR:
lfi03400
]
LFML04_2485
Enzymes [BR:
lfi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LFML04_2485
DNA replication proteins [BR:
lfi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LFML04_2485
DNA repair and recombination proteins [BR:
lfi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LFML04_2485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Tudor_Coilin
Motif
Other DBs
NCBI-ProteinID:
AFS54673
UniProt:
J9ZFD0
LinkDB
All DBs
Position
complement(2362451..2363248)
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AA seq
265 aa
AA seq
DB search
MKVTFLDVETTGLLRDSRARIIELGFSSWENGKLLRKTSTLIKGADIVPDNISKINGITT
EMLKDAPRFEEVWKSIKGDIQGSLLVAHNLAFDVGMVNRELILADRIPLGNMGIDTLPLS
RKMLPELSSYRLGEIAKHMGILNENPHRAMGDLETLEKIVSNLLGSLPGTFDEGVMRLFC
LWGGYPAHRYFRDVVQCAFQKKKKISVLADFSRGLQETDPIVLEPLHANAVSLIGEHLGE
KLEIPFDRILSLEIEGLLPGEVSMK
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagtcacatttttggatgttgaaacgactgggttgttaagagattcccgtgcaaga
atcatagaacttggattcagtagctgggaaaacggaaagctgcttcgtaaaacctctacg
ttgattaagggtgctgatattgttcccgacaatatcagtaaaatcaatggaattacgacc
gaaatgctgaaagatgcccccaggtttgaagaagtctggaaaagtatcaagggggacatt
cagggatcattattggtcgcgcacaatttagcatttgatgtcggtatggtgaatcgggaa
ctgattctcgccgatcgcataccactcggaaacatggggattgatacactgcctctgtct
cgtaaaatgttgccagagctatcaagctatcgccttggtgaaatcgcgaaacatatggga
attttgaacgagaatccccacagggcgatgggggatttggaaacactggaaaagattgta
tcgaatttactcggatcgttaccgggaacgtttgacgaaggagtgatgcgtctgttttgt
ttatggggaggctatccggcacatcgttatttcagggatgttgtccaatgtgcttttcag
aaaaagaaaaagatttctgttctggctgatttttcaagaggtctccaggaaacagatccg
attgttctggaaccgcttcatgcaaatgccgtcagtcttattggagaacatctcggagaa
aaacttgaaattccgtttgaccgcattctttctcttgagattgaaggtttgttgcccggg
gaagtttcgatgaagtag
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