Luteibacter flocculans: IM816_04170
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Entry
IM816_04170 CDS
T08863
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
lfl
Luteibacter flocculans
Brite
KEGG Orthology (KO) [BR:
lfl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfl03021
]
IM816_04170 (rapA)
Transcription machinery [BR:
lfl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
IM816_04170 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
Tudor_RapA
DEAD
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
URL59315
LinkDB
All DBs
Position
complement(947084..949915)
Genome browser
AA seq
943 aa
AA seq
DB search
MFQPGQRWISTAEPELGLGTILRVEGRSVQVLFAKSGVLRPYAADSAPLIRAEFRAGQRV
SGKGIAFLVERIEEREGLLVYRGEGRELEEGQLDDEQALSQADDRLIGGRTDPNDRFDLR
FEALRRRADARRSAAWGLESARIGLVPHQLRVAGIAAARRPPRVLLADEVGLGKTIEAGM
ILARQLATGRAGRVLVLLPETLVYQWFVELLRRFNLSFSIFDEERCEAIEQESDGRNPFE
DEQLVIADFAFLESSPRRAAQLVDAGWDLVVVDEAHHLEWTPEAASPRYRLVEELASATP
GVILLTATPEQLGRAGHFARLRLLDPQRYANLDAYLAEAEGYAALSDVASTLADGASLND
AQRDLLRERFQGDRELAGLLSRDDASAELLAALIDRHGTGRAMFRNRRAGIGGFPRRTPD
FIAIDPNTLDPGRRDALLAEFRSDIQQPPAPLEFDYTNDPRLTALIALLDAHPADKFLLI
CRSQAKVMAIEDALRTKSGVGVARFHEGLGIVQRDRNAAFFAQPDGARLLLCSEIGSEGR
NFQFAHRLVMWDLPLDPDLLEQRIGRLDRIGQKQDIVIHVPVVVQSAQHVLARWYDEGLD
AFRASPADGRELLRRFGSLLASLADEHAREDDERDQELDALIAETRGAHEELSALIHAGR
DHLLELAASRDPHAGDLAGSFAAEDEDASRDAFIQRLFETYGVHAEELARGIVLLDPQYL
STDGLPGFAEGPLSVTFSRDIALAREDLPLLRLDHPMVAAAVDLLVSGEDGNAAFLVDDA
LPVRTALLQTVFVLEVVADRTLDAGRFLPATPLMLTVDTKLSERASFRPSDVALRRAADR
NIEVPRYRKFLSKLVPPMLERAQDLAEARAEGLKAEATETARRELDAEYARLVALHAVNP
SISDDELDAVAAERDALLAAIPDARLRLDAVRFVVSPDFLALR
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgttccaacccggtcaacgctggatctccaccgctgagcccgaactcggtctcggcacc
attcttcgcgtcgaagggcgcagcgtgcaggtactgttcgccaaatccggcgtgctgcgc
ccctacgccgccgacagtgcccccctgatccgtgccgagttccgcgccggacagcgcgta
tccggcaagggcatcgcctttctcgtggaacgtatcgaggaacgcgagggcctgctggtc
tatcgcggcgaaggccgggagctggaagaaggccaactggacgacgaacaggcgctgtcc
caggctgacgatcgcctgatcggcggccgtaccgatcccaacgaccgcttcgacctgcgc
ttcgaggccttgcgtcggcgtgccgatgcccgtcgctccgcggcgtggggcctggaatcc
gcccgtattggtctcgtgccgcaccagctccgcgtggccggcatcgccgcggcgcgacgc
ccgccgcgtgtgctgctcgccgacgaggtgggcctgggcaagacgatcgaagccggcatg
atcctcgcccgccagctcgccaccggccgcgccggccgcgtactggtgctgctgccggaa
accctggtctaccagtggtttgtggaactgctgcgccgcttcaacctgtcgttctccatc
ttcgacgaagagcgctgcgaagccatcgagcaggaaagcgatggacgcaacccgttcgaa
gacgagcaactggtcatcgccgacttcgccttcctcgaatcgtcgccgcgccgcgcggcg
caactggtcgatgccggctgggacctggtggtcgtcgacgaagcacaccacctcgaatgg
accccggaagcggcgagcccgcgctatcggttggtcgaggagctggcgtcggccacgccc
ggcgtcatcctgctcaccgctacgccggaacagctcggccgtgcggggcattttgcgcgc
ctgcgtctgctggacccccagcgctacgccaacctcgacgcttacctcgccgaagcggaa
ggctatgcggccttgtcggacgtggcgagcacgctcgccgacggggcgtcgcttaatgac
gcgcagcgcgacctgcttcgcgagcgttttcagggcgaccgcgaactcgctggcctgctg
tcccgcgacgatgccagcgccgaactgcttgccgcgctgatcgatcgccacggcaccgga
cgcgccatgttccgcaaccgccgcgccggtatcggcggtttcccccggcgcacgcctgat
ttcatcgccatcgatccgaacacgctcgatccgggccggcgcgatgcgctgttggcggaa
ttccgttcggacatccaacagccgcccgcgccgctcgaattcgactacaccaacgacccg
cgtctcaccgcgctgatcgccctgctcgatgcgcaccctgcggacaagttcctgctgatc
tgccgcagccaggcgaaggtcatggcgatcgaagacgcgctgcgtacgaagagcggtgtc
ggcgtggcgcgcttccacgaggggctgggcatcgtccaacgcgatcgcaacgccgcgttc
ttcgcccagcccgacggcgcgcgcttgctgctgtgctcggagatcggctcggaaggacgc
aacttccagttcgcccatcgcttggtgatgtgggatctcccgctcgacccggatctactg
gaacagcgtatcggccgtctcgatcgcattggccagaagcaggacatcgtgattcacgtg
ccggtcgtggtgcagagcgcacagcatgtgctcgcccgctggtacgacgagggtctggac
gcgttccgcgccagccccgcggatggacgcgaactgcttcgccgcttcggcagcctgctg
gcaagccttgccgacgagcacgcacgcgaagacgatgagcgcgaccaggagctggatgcg
ctcatcgccgagacgcgcggtgcgcacgaggaactctctgcgctgatccacgcgggccgc
gatcatctgctcgaactggccgcgagtcgcgacccccatgcgggcgatctcgccggcagc
tttgccgcagaagacgaagacgcgtcgcgtgatgccttcatccagcgcctgttcgaaacc
tatggcgtgcatgccgaggaactggcgcgcggcatcgtactgctcgatccgcaatacctc
tcgaccgatggcctgcctgggttcgccgagggtccgctttcggtcacgttctcgcgcgat
atcgcgctggcacgcgaagatcttcccctgcttcgactcgatcacccgatggtcgcggcc
gcggtcgatctgctggtgtcgggcgaagacggcaatgccgccttcctcgtcgacgacgcc
ctgcccgtccgtaccgccctgctgcagaccgtgttcgtgctggaagtggtggccgatcgc
acactggacgcgggacggttcctgcccgcaacgccactcatgctcaccgtggacaccaag
ctgagcgagcgcgcgtcgttccgtccgagtgacgtcgcgctccgccgtgccgcggaccgc
aacatcgaagtgccgcgctatcgcaagttcctttccaagctcgtaccgccgatgctggaa
cgtgctcaggatctggcggaagcacgtgcggaagggctgaaggccgaagcgacggaaacg
gcacggcgcgaactcgacgcggaatatgctcgcctcgtcgcgttgcatgcggtgaatccg
tcgatcagcgacgacgaactcgacgccgtcgccgccgaacgggatgccctgcttgcggcc
attcccgatgcgcgtctgcgcctggatgcggtgcgcttcgtggtcagcccggacttcctc
gcgctgcgttga
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