Luteibacter flocculans: IM816_04430
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Entry
IM816_04430 CDS
T08863
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lfl
Luteibacter flocculans
Pathway
lfl03030
DNA replication
lfl03430
Mismatch repair
lfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IM816_04430 (dnaE)
03430 Mismatch repair
IM816_04430 (dnaE)
03440 Homologous recombination
IM816_04430 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfl03032
]
IM816_04430 (dnaE)
03400 DNA repair and recombination proteins [BR:
lfl03400
]
IM816_04430 (dnaE)
Enzymes [BR:
lfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IM816_04430 (dnaE)
DNA replication proteins [BR:
lfl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IM816_04430 (dnaE)
DNA repair and recombination proteins [BR:
lfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IM816_04430 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
URL59363
UniProt:
A0ABY4T352
LinkDB
All DBs
Position
complement(1033056..1036601)
Genome browser
AA seq
1181 aa
AA seq
DB search
MSVRFAHLHLHSEYSLVDSTIRIKQLVGACVRAGIPAVALTDESNLFGLVKFYKQCTAAG
IKPIAGCDIWVSSPDDPRPWRLTLLCQDRDGYLNLSRLVSRAWREGQGTGRALVDAAWMN
AESVRGLIAIAGRESEVARAALGAGLPAARLRLEPLRRLFPDRLYLELTRTGRENEEHWV
RAAMALAGEHALPVIASNDVRFLEREGFEAHEARTCINQGRVLADPKRPRDYSEEQYFKS
PEDMEALFADIPEALENTVELAKRCNLELTFGTYYLPNFPVPEGHTLDTFIREQAQKGLE
ERLREHPLAPGKTLADYQARLDREVDVIIRMGFPGYFLIVADFINWGKQNGIPVGPGRGS
GAGSLVAWVLKITDLDPLQFELLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGR
DHVSQIITYGSMAAKAVLRDSGRVLGMGYGQVDRLAKLIPNRPLDLTLSDALGRSEKAKK
EPDRVVKEFCDVYETEEEPRTLIDLALSLEGLTRNAGKHAGGVVIAPTPLTDFAPLYCEA
GGEGVVTQYDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINKRRAQEGVEPLVIEALPLD
DPKVYDLLKKAQTVAVFQLESRGMQGMLKEAQADRFEDIIALVALYRPGPMDLIPSFCAR
KHGKEAVEYPDPRVEPILKETYGIMVYQEQVMQMAQIVGGYTLGGADLLRRAMGKKKPEE
MIKHRATFREGAAKDGIDGEKADAIFDLMEKFAGYGFNKSHAAAYALVSYQTAWLKAHYP
AEFMAATISSDMDNTEKVVTFLDETRAIGIKVLPPDVNASEWMFEAVEPKVVRYGLGAIK
GVGQGICEEIVAERKARGPFRGLVDFCQRVGSNKLNKRTMEALVQSGALDALGVNRATLL
MHIPEAMRAADQEAKNRASGQVDIFGNAFGAAEAPSIIELSGSVPEWPLEQLLQGEHDTL
GHYLSGHPTDPWKAELAQLSSCPIGEIPQRYQPPKPRRSDDDDNASRFRRGPETPWTVAG
MVVGMRKRGDSDAFVQIEDATGLLETSFFREVFTEAAPLLTRGNLIVVEGGLRIDDFAGG
YQLRARKAYSLSDAMEHFGRLLTVKLNGVGADFPQHLRQALMGYRGGRTPLLLAGYRNGV
GQASFELGDAWRVRALPDLVRTLRTLPGVLGTELRIVRPSD
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtccgtttcgcccacctccacctgcacagcgagtattcgctggtcgactcgacc
atccgcatcaagcagctggtcggcgcctgcgtgcgggcgggcatacccgcggtcgccttg
accgacgagagcaacctgttcgggctggtgaagttctacaagcagtgcacggcggcgggc
atcaagcccatcgccggctgcgacatctgggtatccagccccgacgatccacgcccctgg
cggctcaccctgctctgccaggaccgcgacggctacctcaacctgtcgcgtctggtgtcc
cgcgcgtggcgcgagggccagggcaccggccgggcgctggtggatgccgcctggatgaac
gccgaaagcgtgcgcgggctcatcgccatcgccggccgcgaaagcgaagtggcgcgagcg
gcgctcggcgccggcctgcccgcggcccgtctgcgcctcgaaccgctgcgccgactgttc
cctgatcgcctgtacctggaactcacccgcacgggccgggagaacgaagaacattgggtg
cgcgccgccatggcgctcgctggcgaacacgcgttgccggtcattgccagcaacgacgtt
cgcttcctcgaacgcgagggtttcgaggcacacgaagcgcgcacgtgcatcaaccagggc
cgtgtgctggccgacccaaagcggccgcgcgattacagcgaagagcagtatttcaagtcg
cccgaggacatggaggcgctgttcgccgacattccggaggcactggaaaacacggtcgaa
ctcgccaagcgttgcaacctggaactcaccttcggcacttattacctgccgaactttccg
gtgcccgaaggccacacgctcgacacgttcattcgggagcaggcgcagaagggtctcgag
gaacgcctgcgcgagcatccgctcgccccgggcaagacactggccgactatcaggcacgc
ctcgatcgcgaggtggacgtcatcatccggatgggctttcccggctacttcctgatcgtg
gcggacttcatcaactggggtaagcagaacggcattccggtaggccccggtcgcggttcg
ggcgccggctcgctggtggcctgggtgctgaagatcaccgacctcgatccactccagttc
gagctgctgttcgagcgattcctgaatcccgaacgcgtgtcgatgcccgacttcgacatc
gacttctgcatggatcgccgcgacgaggtcatcgactacgtcgcgcgcaaatacggccgc
gatcacgtcagccagatcatcacctacggttcgatggcggcgaaggccgtattgcgcgac
tcaggccgcgtgctcggcatgggctacggccaggtggatcggctcgccaagctgattccg
aaccggccgctcgacctcacgctgtccgatgcgctcggtcgctcggaaaaagcgaagaaa
gagccggaccgcgtcgtcaaggaattctgcgacgtctacgagaccgaggaagaaccgcgc
acgctcatcgatcttgcgctcagcctcgaaggcctcacgcgcaacgctggcaagcacgcg
ggcggcgtggtcattgcgcccacgcccctgaccgacttcgcgccgctgtattgtgaagcg
ggcggcgaaggcgtcgtcacgcagtacgacaaggacgacgtcgaggccgtgggtctcgtg
aagttcgactttctcggcctgcgcacgctcacgatcatcgattgggcggtgaaggcgatc
aacaagcgacgcgcgcaggaaggcgtcgaaccgctggtgatcgaagcgttgccgctggac
gacccgaaggtctacgaccttttgaaaaaggcgcagaccgtcgccgtcttccagctcgaa
tcgcgcggcatgcaaggcatgctcaaggaagcgcaggccgaccgcttcgaagacatcatc
gcgctcgtggcgctgtaccgccccggcccgatggatctgatccccagtttctgcgcgcgc
aagcacggcaaggaggcggtggaatatcccgatccccgcgtcgagcccatcctgaaagag
acctacggcatcatggtctatcaggagcaggtgatgcagatggcgcagatcgtcggcggc
tatacgctcggcggcgccgacctgctgcgccgcgcgatgggcaagaagaagcccgaggaa
atgatcaagcatcgcgccaccttccgcgaaggtgccgcgaaggatggcatcgacggcgag
aaggccgacgcgatcttcgacctcatggagaagttcgcaggctacggcttcaacaaatcg
cacgccgccgcgtacgcgctggtctcataccagaccgcatggctgaaagcgcactacccg
gccgagttcatggccgcgacgatctcgtcggacatggacaacaccgagaaggtagtcacc
ttcctcgacgaaacgcgggccatcggcatcaaagtgctgcccccggacgtgaacgcctcc
gagtggatgttcgaggcggtggagccgaaggtcgtgcgctacggcctcggcgccatcaag
ggcgtgggccagggcatctgcgaagagatcgtcgccgagcgcaaggcgcgcggaccgttc
cgcggcctggtcgatttctgccagcgtgtcggctcgaacaagctcaacaagcggaccatg
gaagcgctggtgcaatcgggcgcgctggacgcgcttggcgtcaaccgcgccacgctgctc
atgcacatccccgaagccatgcgcgcggccgaccaggaagcgaagaatcgcgcgtcgggc
caggtcgacatcttcggcaatgcgttcggtgcggccgaggcccccagcattatcgaactg
tcgggttctgtgcccgaatggccgctggaacaactgctgcagggcgagcacgacacactc
ggccactatctgtcgggccatccgaccgatccctggaaggcggagcttgcgcagttgtcg
agctgtccgatcggtgagattccgcaacgctatcagccgcccaagccgcggcgcagcgac
gatgacgacaacgcaagccgtttccggcgtggccccgaaacgccgtggaccgtggccggc
atggtcgtgggcatgcgcaagcgcggagacagcgacgccttcgtgcagatcgaggacgcc
acaggcctgctggaaaccagcttcttccgcgaagtgttcacggaagcggcgccgttgctc
acgcgcggcaacctcatcgtcgtggagggcggcctgcggatcgacgatttcgccggtggt
tatcaactgcgtgcgcgcaaggcgtactcgttgtccgatgcgatggaacacttcggccgg
ttactgacggtgaagctcaacggcgtgggtgcggattttccgcagcacttacgtcaggcg
ctaatgggctatcgcggtggacgcacaccattgctactcgcgggataccgcaatggcgtc
ggccaggccagcttcgaactgggcgacgcgtggcgggttcgcgccctgcctgatctcgtg
cgtacgctacgcacgctgcccggcgtactcggtaccgaactgcggatcgtgcggccgtcc
gattga
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