Luteibacter flocculans: IM816_04970
Help
Entry
IM816_04970 CDS
T08863
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
lfl
Luteibacter flocculans
Pathway
lfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IM816_04970 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfl03400
]
IM816_04970 (recB)
Enzymes [BR:
lfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IM816_04970 (recB)
DNA repair and recombination proteins [BR:
lfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IM816_04970 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
PDDEXK_1
AAA_25
AAA_30
DUF3799
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
URL59459
LinkDB
All DBs
Position
1150253..1153900
Genome browser
AA seq
1215 aa
AA seq
DB search
MSTPMQPLQPVTMPLHGVRLIEASAGTGKTWTIAALYVRAVLGHDMPQPLLPPQLLVVTF
TEAATQELRERIRARLVEAARAFRASASDEPFLAELIATYPVDAHASCARRLELAAQWMD
EAAIFTIHGWSQRMLTQHAFGSGHAFALTLEPDESELLADCVRDYWRQTFYPLPPRQAEM
VLEEWRSPDDLLRALKPLFYGGEVTLRVAGEVLAAATDPRALMASREAWQAEHDRLLAEA
AEAWRSDVDRIEALLTEASATKVLNNTRYRPDRMPGYLAPVRRWAFGGEAIEEALQRFTA
TRLADAAGKGKQRPEHPAFAALDAWQAWHEHKVDIRHALLVDALARVRERFAAQKRRRAQ
IGFDDLLHRLDAALRSDAGDALAETIRRQFPLALIDEFQDTDPVQYRIFSRIYAGVPDVG
LLLIGDPKQAIYAFRGADIHTYLSARAQALAPHYSLDTNYRSSHAMIEAVNAVFLHGERH
PRGAFHFPDRGLPFAAVSAKGRAERFVVAKESQPALRLWLLDDERPVGVRHYREQMADAC
ASEIVRLLEGATRGDTGFAEADGHIVPLRPADVAVLVRSRSEAAQVRASLAARQVRSVFL
SDRDSVWESTEAEDVLAWLRAAAAPASDTAMRAALATRTLDLGYTELEQLNVDEAHWERR
GEEFLALRQVWQHAGVLAMLHALLHRFDLPARLLPRAGGERALTNVLHLAELLQHAASTL
DGEQALIRHVAERIADTASHHGDDQLVRLESDDDVVKVITIHKSKGLEYPIVFLPFVCAS
GGPHPGQTAYRYHDGTGSQLELVSKSKGGAASEQAKDAADLAAMQEDLRLLYVAMTRARH
ACYVGVAPVCHGTSRTPQVHRSAFGHLLSGGEEIGNGRIAGLLHELAQATPSIRVEYMPP
PDERRFVAPDRPEAARPAREAMARRADPWRIASYSGLRYADEVSAPETATDDVIVEYATE
PVVAAPAVAGIHAFERGAEAGTFLHDLLEWIAEEGFAIVASDSARLRDTVARRCERRGWS
AFIDLLTDWLSMLLRTPLALPDGGQLALASLDDPSRYRAELEFLFASRGVDTLALDRIVR
EHTLDGEARPTLAADIINGMLKGFIDLIVEHEGRWYVIDYKSNWLGVDAQAYTTAAMRRS
ILEARYELQYALYLLALHRQLRARLGDAYDYDTHIGGAVYLYLRGVDGHGHGVHVERPPR
AMIEAMDRLFEGASA
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgccgatgcagccactgcagcctgtgaccatgccattgcatggcgtgcgcctc
atcgaggcgagcgcaggcaccggcaagacctggaccatcgcggcgctctatgtgcgcgcc
gtgttgggtcacgacatgccgcagcccttgcttccgccgcagttgctcgtggtcacgttc
accgaagccgccacgcaggagctgcgcgagcgcatccgtgcacgtctcgtggaggcggct
cgcgcgttccgcgcgtcggcatccgacgagccgttcctggccgagctgatcgcgacctat
cccgtcgacgcgcacgcgtcatgtgcccgacgtctcgaactggccgcgcagtggatggac
gaagcggcgatcttcaccatccacggctggagccagcgcatgctcacccagcatgccttc
ggcagcggacacgcattcgcgctcacgctggaaccggacgaaagcgagttgctggccgat
tgcgttcgcgactactggcgtcagacgttctatccgttgccgccacggcaggccgagatg
gtgctggaagaatggcgctcgcccgacgacttgctgcgtgcgctgaaaccactgttctac
ggcggcgaagtcacgctgcgtgtcgcgggtgaggtgcttgccgccgcgaccgatccgcgc
gcattgatggcctcgcgcgaggcatggcaagccgagcacgatcggctgctcgcggaagcg
gcggaggcgtggcgcagcgatgtcgatcgtatcgaagccctgctcaccgaggcgtccgcg
accaaggtgttgaacaacacgcgctatcgtcccgatcgcatgccgggctatctcgccccg
gtgcgacgttgggcgttcggcggtgaggcgatcgaggaagcgctgcagcgtttcaccgcc
acgcgcctggcggatgccgcaggcaagggcaaacagcgtccggaacatccggcgtttgca
gcgttggatgcctggcaagcgtggcatgagcacaaggtcgacattcgccacgccttgctg
gtcgatgcgctggcgcgcgtgcgcgaacggtttgctgcgcagaagcggcggcgcgcacag
atcgggttcgacgacctgctgcatcgtctcgacgctgctctgcgcagcgacgcgggagac
gccttggctgaaaccattcgccggcagttcccgctggcgttgatcgacgagtttcaggac
accgatcccgttcagtaccgcattttcagtcgcatctatgccggtgtccccgacgttggc
ctgttgttgatcggcgatccgaagcaggcgatctacgccttccgcggtgccgatattcat
acctatctctcggcgcgtgcgcaggcgctcgcgccgcactacagcctggacacgaactac
cgctcgagtcacgccatgatcgaggcggtcaatgccgtcttcctgcacggcgagcggcat
cctcgtggcgcctttcattttccggatcgcggcttgcccttcgcggcggtgagcgcaaag
ggcagggcggagcgcttcgtcgtcgccaaggaatcgcagccggcgttgcgcctctggctg
ctcgacgacgaacggcccgtcggcgtgcgtcattaccgcgagcagatggcggacgcgtgc
gccagcgagatcgtgcgcctgctggaaggtgccacgcgcggggacacggggtttgccgag
gcagacgggcacatcgtgccgctccgtccggcggacgtggccgtgctcgtgcgcagccgc
tcggaagcggcacaggtgcgagcgtcgctggctgcccgtcaggttcgcagcgtgtttttg
tccgatcgcgattcggtctgggaaagcacggaggcggaggacgtactcgcgtggttgcgt
gccgccgctgcccctgcgtcggacacggcgatgcgcgcggccctggctacacgcacgctc
gaccttggctataccgaactcgaacagctgaatgtggacgaggcccattgggagcgccgc
ggcgaggaattcctggccctgcgccaggtctggcagcatgccggcgtgcttgcgatgctg
catgcgctgctgcatcgcttcgacctgccggcacgcctgctcccgcgcgctggtggcgag
cgcgcgctgaccaatgtgctgcatctggccgagttgttgcagcacgcggcttccacgctc
gacggcgagcaggccctgattcgccacgtggccgaacgcatcgccgatacggccagccac
catggcgacgaccagctcgtgcgcctggaaagcgatgacgatgtggtcaaagtgatcacg
atccacaagtccaagggcctggagtacccgatcgtattcctgccgtttgtctgtgccagc
ggcggtccgcatccgggccaaaccgcttatcgatatcacgatgggacgggaagccaactg
gagctggtgagcaagtcgaaaggcggcgccgcttccgaacaggccaaggacgcggcggat
ctggcggcaatgcaggaagacctgcgcctgctctatgtagcgatgacgcgtgcacgacac
gcttgctacgtgggtgtcgcgccggtgtgccacggcacctcgcgtacgccgcaggtgcat
cgcagcgcgttcgggcatttgctcagcggtggcgaggagatcggcaacggtcgcatcgcg
ggcctgctgcacgagctggcgcaggctacgccgtcgatccgcgtggaatacatgccgccc
cctgacgagcgccgttttgtcgcgccggatcgtcccgaggcagcgcgacccgcacgagag
gccatggcgaggcgcgcggacccctggcgcatcgccagctacagcggcctgcgctatgcg
gacgaggtgtctgcaccggaaaccgcgacggacgacgtcatcgtggaatacgccaccgag
cccgtcgtcgcggccccggctgtggcaggtattcacgccttcgagcggggcgcagaggcg
ggtaccttcctgcacgatcttctcgaatggattgcggaggaaggcttcgccatcgtagcc
agtgattccgcacggctgcgtgacacggtggcgcgccgttgcgaacggcggggctggagt
gcattcatcgatctcttgacggattggctgtcgatgcttttgcggacgccgctggcgctg
ccggacggtggccagctcgcgcttgcctcgctcgacgatccctcgcgctatcgtgccgag
ctggagttcctgttcgcctcgcgtggcgtcgatacgctcgccctggatcgcatcgtgcgc
gagcacaccttggatggcgaggcgcgcccgacgctggccgcggacatcatcaacggtatg
ctcaagggcttcatcgatctgatcgtcgagcacgaaggacgctggtacgtcatcgactac
aagtcgaactggcttggcgtggatgctcaggcgtacacgaccgctgcgatgcgccgctcc
attctggaagcgcgctacgaactgcaatacgcgttgtacctgcttgcattgcatcgccaa
ctgcgcgcccgactcggtgacgcctacgactacgacacgcacatcggtggtgcggtctat
ctctatctgcgtggcgtggatgggcacgggcacggggtgcacgtggaacggccgcctcgg
gcgatgatcgaggcgatggatcggttgttcgaaggagcctccgcatga
DBGET
integrated database retrieval system
