Luteibacter flocculans: IM816_04975
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Entry
IM816_04975 CDS
T08863
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lfl
Luteibacter flocculans
Pathway
lfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IM816_04975 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfl03400
]
IM816_04975 (recD)
Enzymes [BR:
lfl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IM816_04975 (recD)
DNA repair and recombination proteins [BR:
lfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IM816_04975 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
Helicase_RecD
SH3_13
AAA_22
UvrD-helicase
AAA_28
SLFN-g3_helicase
nSTAND3
AAA_17
T2SSE
AAA_16
AAA_24
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
URL59460
LinkDB
All DBs
Position
1153897..1155771
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AA seq
624 aa
AA seq
DB search
MIADGVAWLDQALAEGRIERVDRAFARFLRTLDPAVDPRVQVAAALLSRELGEGHICMPL
TTLREREPALGDPSLFLSSTPLVASADGDPSAPLVLDHDLLYMRRFWRDESRVAQAIVGR
LGVQPVHPDLPAELERLFPSDDVRPDWQKIACALAARSRFAVITGGPGTGKTTTVVRLLG
LLQTLALREGGSRLRIRLAAPTGKAAARLNASIAGQVAQLQVDPAVKQAIPAEVTTLHRL
LGSRPDTRAFRHDAENPLHLDVLVIDEASMIDLEMMAATLDALPPTARLVLLGDKDQLSS
VEAGAVLGDLCARADVGHYSLATRDWIAAACEEDVSAWTDGDSARALDQHVAMLRHSRRF
GSDSGIGALATAINQGDAHAARAVFASFADVTLGAPSPAAIATLAIEGRDGAPGYRHYLD
AIENTRPSVGASEDELMQWGRGALRAYAGFQLLCATRLGEHGVLAQNARIAQGLLDRGLI
EATGGWYEGRPVMLTRNDYALGLMNGDVGVTLWVPDGRGGMALRVAFSVMDEHGGERIRF
VVPSRLVAVETVYAMTVHKSQGSEFEHTALALPPEPSPVLTRELVYTGVTRARRWFTLLA
APDILGYAVQRKTQRASGLLRRLL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgatggcgttgcatggctcgatcaagcgcttgccgagggccggatcgagcgc
gtcgatcgggcctttgcccgtttcctgcgcacgctggacccggcggtcgatccgcgtgtt
caggtggctgccgcactcctgagtcgcgaactgggcgaggggcatatctgcatgccgctg
acgaccttgcgcgagcgcgagccggcgcttggcgatccgtcgctttttctttcctcgacg
ccgttggtggcctcagccgatggcgatccgtcggcacccttggtgctcgaccacgatctg
ctctatatgcgccgtttctggcgcgacgaatcccgcgttgcgcaagcaatcgtcggccgg
ctcggcgtgcagccggtgcatccggatctgcccgcggaacttgagcggctgtttccatcc
gacgatgtgcgaccggactggcagaagatcgcctgcgcgctggcagcgcggtcccgcttc
gccgtcatcacgggggggccgggcactggtaagacgaccaccgtcgtgcgcctgctcggc
ttgctgcagaccttggcgttacgcgaaggcgggagtcgcctgcgcattcgcctagccgcg
ccaaccggtaaggcggcggcacggctcaatgcgtccatcgccgggcaggtagcgcagttg
caggtcgatcctgcggtgaagcaggcgattcccgctgaggtgaccacgttgcatcgcctg
ctcggcagtcgcccggatacgcgagcgttccgtcacgatgcagagaacccgttgcacctc
gacgtactcgtcatcgacgaggcatcgatgatcgacctcgagatgatggctgcgacgctc
gatgccttgccgccaacggcacggcttgtgctgctcggcgacaaggatcagctttcatcg
gtggaagccggtgcggtgctcggtgacctttgcgctcgtgcggacgtcggccactactca
ctcgcgacgcgtgactggattgcggcagcctgcgaggaagacgtgtcggcctggacggat
ggcgacagcgcacgtgcgttggatcagcatgtggccatgctgcggcacagtcgccgcttc
ggcagcgacagcggcatcggcgcgctggcgacggcgatcaatcagggcgatgcgcacgca
gcgcgcgccgtgtttgcgtcattcgccgacgtgacgctcggcgcgccgtcgcctgctgcg
atcgccaccttggccatcgaggggcgtgacggcgcgcctggctatcggcattacctcgac
gccatcgagaacacacgcccctcggtcggcgcgagcgaagacgaactgatgcagtggggc
cgtggcgccttgcgtgcctatgccgggttccagctgctttgcgccacgcgcctcggcgag
catggcgtgctcgcgcagaacgcgcgcatcgcacagggattgctggatcgtggcctgatc
gaagcgacgggcggttggtacgaagggcgccctgtcatgttgacccgcaacgactacgcg
ctgggcctcatgaacggcgacgtgggcgtgacgctatgggtacccgatggccgcggcggc
atggccttgcgcgtggcgttttcggtgatggacgaacacggcggcgagcgcattcgtttc
gtggtgccgagccggctggtggcggtggagacggtgtacgcgatgacggtgcacaagtcg
cagggttccgagttcgaacatacggcgctggccttgccgcccgaaccgtcgccggtgctg
acccgcgaactcgtctataccggcgtgacccgtgcgcgtcgctggttcacgctgttggcc
gcgccggacatcctcggctacgccgtgcagcggaaaacgcagcgagcctcggggctgctg
cgtcgtttgctctga
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