Luteibacter flocculans: IM816_06110
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Entry
IM816_06110 CDS
T08863
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lfl
Luteibacter flocculans
Pathway
lfl03410
Base excision repair
lfl03430
Mismatch repair
lfl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
IM816_06110 (recJ)
03430 Mismatch repair
IM816_06110 (recJ)
03440 Homologous recombination
IM816_06110 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfl03400
]
IM816_06110 (recJ)
DNA repair and recombination proteins [BR:
lfl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
IM816_06110 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
IM816_06110 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
IM816_06110 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
URL59667
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All DBs
Position
1384103..1385815
Genome browser
AA seq
570 aa
AA seq
DB search
MTAKVWRQRIVTTAPSGWPAHVHPVIQRIYAARGVCTPEDAEHRLARLLPPHLLGGMERA
VALLMRAIEADQRIVIAGDYDCDGATGTAVAERGLRLLGARHVSHVVPNRFVHGYGLSEA
LVASLEPTPDLIVTVDNGVASVAGVAAARARGIAVLVTDHHLPGDTLPDADAIVNPNLAD
DGFPSKALAGVGVMFYLLLGLRAALRSAGRFPQGEPDLGALLDLVALGTVADLVPLDFNN
RVLVEAGLKRMRAGKACAGITALIEASGRSLATVGATDLAFAVGPRLNAAGRLEDMSLGV
ACLLTDDQGIARRYAEQLSAINQERRDMQAGMVEEAETMVARAAHVDAVGVALFDPGWHA
GVVGLVASKLKEKLHRPVVAFAPAGDDSDELRGSARSISGFHIRDAFAEIDAKHPGLILR
FGGHAMAAGLSLRASDIERFAAAFDAVARRHLDEERLQALVHTDGELDYRDHTLDLARQL
RHAGPWGQAFPPPLFEARVECASWKPMGSRHLRLQLRHTQGGAPLDAVMFNCYDGTPPPT
RMRVAYELSVNDWQGRESLRLLLTHMEASA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgaaggtgtggcgccagcgcatcgtgacaacggcgccgagcggctggcctgcg
cacgtgcatccggtcatccaacgcatctacgccgcgcgtggcgtctgcacgcctgaagac
gcggaacaccgtctcgcacgcctgttgccgccacacctgctcggcggcatggagcgggct
gtcgcgctgctcatgcgcgcgatcgaagcggaccagcgcatcgtcatcgcaggcgactac
gactgcgacggtgccacgggcacggcggtggcggagcgcggtctgcgtctgctcggcgca
cgccatgtcagccacgtggtgccaaaccgtttcgtgcacggctatgggctcagcgaggca
ttagtggcgtcgctggagcccacgcccgatctcatcgttaccgtcgataacggggtggcg
agcgtggccggtgtcgcggcggcgcgtgcacgtggcatcgcagtgctcgtcacggaccat
catctgccgggcgacacgctgccggatgccgacgcgatcgtgaatccgaaccttgccgac
gacggcttcccgagcaaggcgctggccggtgtcggcgtgatgttctatctgttgctcggc
ctgcgcgcggcattgcgcagcgcggggcgttttccacagggcgaaccggatctcggcgcg
ctgctggatctcgtcgcgctcggtacggtcgccgatctggtgccgctcgatttcaacaac
cgagtgctggtggaagcgggcctgaagcgcatgcgcgcaggcaaggcctgcgcgggcatc
accgcgctcatcgaggcgagtggtcgctcgctggcgaccgtcggtgccacggatctcgct
tttgccgtcggcccgcgcctcaacgcagcggggcgtctcgaagacatgtcgctcggcgtg
gcgtgcctgcttaccgacgaccaaggcatcgcacggcgttatgcggagcagttgtcggcg
atcaaccaggaacgccgcgacatgcaggcgggcatggtggaggaagccgagaccatggtg
gcgcgtgccgcgcatgtggatgccgtcggcgttgccttgttcgatccgggctggcatgcg
ggtgtcgttggcctcgtcgcctccaagctcaaggaaaaattgcatcggccggtcgtggcg
ttcgcgcctgcgggagacgacagcgacgagctgcgcggctcggcgcgttcgatctcgggc
ttccacatccgcgatgcgttcgcggagatcgacgcgaagcatccgggcctgatcctgcgc
ttcggcggtcatgccatggcagcggggctcagccttcgtgccagtgacatcgagcgtttc
gcggcggcgttcgacgcggtggcgcggcgacatctcgatgaggaacgcctgcaggcgctc
gtccataccgatggcgaactcgactaccgcgaccacacgctcgatctcgcgcgacagtta
cgtcatgcgggaccgtgggggcaggcgtttccgcctccgctgttcgaggcgcgggtcgag
tgcgcctcatggaagccgatgggcagtcgtcatctgcgcttgcaactgcgccatacgcaa
ggcggtgcgccgctggatgccgtgatgttcaactgctacgacggtacgccgccgccgacg
cgcatgcgcgtggcgtatgaactctccgtcaacgactggcaaggccgggagagcctgcga
ctgttgctcacgcacatggaagcgagcgcgtga
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