Luteibacter flocculans: IM816_11655
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Entry
IM816_11655 CDS
T08863
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lfl
Luteibacter flocculans
Pathway
lfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IM816_11655 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfl03019
]
IM816_11655 (pcnB)
Enzymes [BR:
lfl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
IM816_11655 (pcnB)
Messenger RNA biogenesis [BR:
lfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IM816_11655 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Peptidase_M16_C
Motif
Other DBs
NCBI-ProteinID:
URL57294
UniProt:
A0ABY4T301
LinkDB
All DBs
Position
complement(2728809..2730167)
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AA seq
452 aa
AA seq
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MNPDTRSDVPPVMRIIPREQHSISRKNISKAALRVLYRLHDAGFAAYLVGGAVRDLLLGG
HPKDFDVATDATPDEVKGLFRNCRLIGRRFRLAHVVFGPEIIEVATFRGTGEEGGEGDRH
IVDGRIVRDNIWGTIEEDAVRRDFRVNALYYDISDFSVRDYVGGMRDLEDRSMRLIGDPE
QRYREDPVRMLRAARLAAKLGFTIDPATAAPFSTLGHLLGEAAPARLFDESLKLFLGGHG
LKSFKMLEACGLLKFLFPATARALERGDNALRALVEQGLANTDARIAEGKSVTPAFLYAV
LLWGEVRDQAQGWIAQGYDANEAWQRAAVHVVGEQCQRVAIPRRFTFTMEEIWALQPRFE
QIHRKRVFRLMSHPRFRAAFDFLLLRAHESPGMRELGEWWAHAQQLPPEMLAAALGGGGV
PAHEATAPAAAVRKRRRRRKPAGRGKGDSGGA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
ttgaatcccgataccaggagtgacgttccgccggtaatgcgcattatcccgcgtgaacag
cattccatttcccgcaagaacatcagcaaggccgcgctgcgcgtgctttatcgcctgcac
gacgcgggttttgccgcgtatctcgtcggcggggcggtacgcgacctgctgctgggcggg
cacccgaaggacttcgacgtcgccaccgacgccacgcccgacgaggtaaaggggctgttc
cgcaactgccgcctgatcggccggcgcttccggctggctcatgtggtgttcggcccggaa
atcatcgaggtcgccaccttccgcggcacgggggaggaagggggcgagggcgaccgtcac
atcgtcgacgggcgcatcgtcagggacaacatatggggcacgatcgaggaggatgcggtg
cgccgcgacttccgcgtcaacgccctctactacgacatctccgatttcagcgtgcgcgac
tacgtcggcggcatgcgcgacctcgaagaccgcagcatgcgcctgatcggcgatcccgag
cagcgttaccgcgaagacccggtacgcatgcttcgcgcggctcgcctggcggccaagctg
ggcttcacgatcgatcccgcgacggcggcgcctttctccaccctcgggcacctgctgggc
gaagcggcaccggcacgcctgttcgacgagtcgctgaagctgttccttggcggtcatggc
ctcaagagcttcaagatgcttgaggcctgcggtctgctcaagttcctctttcccgccacg
gcgcgtgcgctcgaacgcggcgacaacgccttgcgtgcgctcgtggagcagggcctcgcc
aataccgatgcgcgcatcgccgaaggcaagtccgtcacgccggccttcctgtacgcggtg
ctcctgtggggcgaggtccgcgatcaggcgcagggctggatcgcccagggctacgacgcc
aacgaggcctggcagcgggcggcggtccacgtggtgggcgagcagtgccagcgagtcgcg
attccgcgccgtttcaccttcacgatggaagaaatctgggcgctgcagccgcgcttcgag
cagatccaccgcaagcgcgtttttcgcttgatgtcgcatccccggttccgcgctgcgttc
gacttcctgctgctgcgtgcgcacgaatcgccgggcatgcgcgaactgggcgagtggtgg
gcgcatgcccagcagttgccgcccgagatgctcgccgccgcgcttggcggcggcggggtt
cccgcgcacgaagcgaccgccccggctgccgcagtgcgcaagcgtcggcgtcggcgtaag
cctgccgggcgcggcaagggcgattcgggcggcgcgtga
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