Luteibacter flocculans: IM816_14125
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Entry
IM816_14125 CDS
T08863
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lfl
Luteibacter flocculans
Pathway
lfl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lfl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IM816_14125 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfl03019
]
IM816_14125 (recQ)
03400 DNA repair and recombination proteins [BR:
lfl03400
]
IM816_14125 (recQ)
Enzymes [BR:
lfl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IM816_14125 (recQ)
Messenger RNA biogenesis [BR:
lfl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IM816_14125 (recQ)
DNA repair and recombination proteins [BR:
lfl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IM816_14125 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
ResIII
Motif
Other DBs
NCBI-ProteinID:
URL57745
LinkDB
All DBs
Position
complement(3258762..3260576)
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AA seq
604 aa
AA seq
DB search
MSSPALDLLHSVFGYPGFRGQQQAIVEHVAEGGDALVLMPTGGGKSLCFQIPALIRQGIG
IVVSPLIALMQDQVDALNEAGVKARYLNSSLDAMTQREVEDLMLGGELDMLYVAPERLLT
GRFLGLLDRVPIALFAIDEAHCVSQWGHDFRPEYRELAILHERFPEVPRIALTATADERT
REEIVERLGLQAARRFVSSFDRPNIRYRVAPRQNARRQLLDFLDGHRGEAGIVYCLSRRK
VDETAAWLAEAGVESLPYHAGLDAQTRTRHQQRFLREDGVVMVATVAFGMGIDKPDVRFV
AHLDLPRSMEGYYQETGRAGRDGLPAEAWMVYGLGDVVTMSQMIAQSEAGDDRKRIERLK
LDSLLGYAEATRCRRQLLLEAFAEIYPEPCGNCDNCLAPPKTWDATLAAQKAMSCIYRTG
QRYGAGHLIDVLRGEGNERLRNLGHDQLRVFGVGADMDATQWRSVFRQLLAAGLIEADPD
GYGTLRLSTQSGPVLKGECKVWLREDARPAKGRRAARATPAATGTSLGIEEIELPLWNEL
RRVRAELAKQHGVPAYVIFHDATLLAMLRALPGNEEELGSISGVGENKLKRYGRDFLAVL
TAAG
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccccagccctcgatcttctccattccgttttcggctaccccggtttccgcggt
caacagcaggccatcgtcgaacacgtcgccgagggtggcgacgccctcgtgctgatgccc
acgggcggtggcaagtcgctgtgcttccagattcctgctctcatacgccaaggtatcggc
atcgtcgtctcgcccttgatcgctctgatgcaggaccaggtcgatgcgctcaacgaagca
ggcgtgaaggcgcggtatctgaactccagcctggacgcgatgacgcagcgcgaggtcgaa
gacctcatgctggggggcgaactggacatgctctacgtcgcgcccgaacgcctgctcacc
gggcgttttcttggcttgctcgatcgcgtgccgattgcgctgttcgccatcgacgaagcg
cactgcgtgtcccagtggggacacgacttccgtccggaataccgtgagctggcgatcctg
cacgagcgctttccggaggtgccgcgcatcgcactcacggccaccgccgatgagcgcact
cgcgaggagatcgtcgagcggctcggtttgcaggcggcacgacgcttcgtttcaagcttt
gatcgcccgaacatccgttatcgcgtggcgccgcgacagaacgcgcgccggcagttgctg
gactttctcgacgggcatcgcggcgaggcgggcatcgtctattgcctcagccggcgcaag
gtggatgagaccgccgcgtggctcgccgaggcgggcgtggaatcgctgccttaccacgcg
ggcctcgacgcgcaaacgcgtacgcggcaccagcaaaggttcctgcgcgaagacggtgtc
gtcatggtcgctacggtggccttcggtatgggcatcgacaaacccgacgtgcgcttcgtc
gcccacctcgatcttccgcgcagcatggaaggctattaccaggagaccggtcgtgccggt
cgcgatggcctgccggccgaggcgtggatggtctacggtctcggcgacgtcgttacgatg
agccagatgatcgcgcagtcggaagcgggcgacgatcgcaagcgcatcgaacgcctgaag
ctggattccttgctgggctatgcggaagccacgcgttgccgtcgtcagcttctgctcgaa
gccttcgcggagatttatcccgagccctgcggcaattgcgacaactgcctggcgccgccg
aagacgtgggatgccacgctcgctgcgcagaaggccatgtcgtgcatctatcgcacgggg
cagcgttacggcgcgggccatctcatcgacgttctacgaggcgagggtaacgagcgcctg
cgcaatctcggtcacgatcaattgcgcgtcttcggcgtgggtgccgacatggatgcgacg
caatggcgctcggtgtttcgccagttgctcgcagcaggactgatcgaagccgatcccgac
ggctacggcaccttgcgtttgtcgacgcagagcggcccggtgttgaagggtgaatgcaag
gtctggctgcgcgaggatgcgcgtcctgcgaagggacgtcgcgcggcacgtgccacgcct
gctgcgacgggtacgtcgctgggcatcgaggagatcgagctgccgctgtggaacgaactg
cgccgggtgcgtgcggaacttgccaagcagcatggcgtcccggcctatgtgattttccac
gacgcgacattgctcgcgatgttgcgtgcgctgcccggtaatgaagaagaactgggctcg
atcagtggcgtgggcgagaacaagctgaagcgctacggcagggatttcctcgccgtgctg
accgcggccggctga
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