Luteibacter flocculans: IM816_14245
Help
Entry
IM816_14245 CDS
T08863
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
lfl
Luteibacter flocculans
Pathway
lfl02020
Two-component system
lfl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lfl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IM816_14245
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IM816_14245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfl03021
]
IM816_14245
Transcription machinery [BR:
lfl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IM816_14245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_12
RNA_pol_Rpc82
HTH_IclR
HTH_31
HTH_38
Motif
Other DBs
NCBI-ProteinID:
URL57768
LinkDB
All DBs
Position
3279784..3281271
Genome browser
AA seq
495 aa
AA seq
DB search
MKPGLQFRLHQQLTLTPQLQQAIRLLQLSQLELEAELRQIAESNPLLEFAEDAEAEPEAE
GEADEGYESPEFLSREQQPTKASKEDEESTATPSEELAPEWDDDRFHGEAGDYSGSSSRT
GGGDEDGFEPQNAAPESLQQHLEWQLNLSQFSPRDHAIAMAIIHALDEDGYLRDGVAAVE
AALPAQLHASAEEIEAVRQRVQRFDPTGIASLDLRDCLFCQLSQFSFETPHRELAIRIVN
EELELLARNDAAKIARRLKAPEADVAAAAALIRSLDPRPGAALDATPVEYVAPDVYARRE
NGRWQVSLNPDAQPRLGLNQHYCNLIARARGDDATWMKGQLQEARWLLKSLQSRAETLQK
VAEVIVRRQSAFLDYGPEAMHPLVLREVAEEVGMHESTISRVTTRKYMHTPRGTFELKHF
FSSGVATEDGGSASATAIQAMLRKLILGEDARRPLSDQALAEELHRRGIQVARRTVAKYR
EAMRIPSSSERIRAS
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccggacttcagtttcgcctccatcagcagctcacgctgaccccgcagctccaa
caggccatccgcctgctgcagttgtcacagctcgagctcgaggccgaactccgccagatc
gcggaaagcaacccgctgctcgaattcgcggaagacgccgaggccgagccggaggcggag
ggcgaggcagacgagggttacgaaagccccgagttcctctcgcgcgagcagcagcccacc
aaggcgtcgaaagaagacgaggaatcgaccgccacgccgtcggaagaactggcgcccgaa
tgggatgacgaccgtttccacggtgaagcaggcgactactccggctcgtcctcgcggacg
ggaggcggcgacgaagatggcttcgagcctcagaacgccgcaccggaaagccttcagcag
cacctggagtggcagctcaatctgtcgcagttctcgccgcgcgatcacgccatcgccatg
gcgatcatccacgcactggacgaggacggttacctgcgtgacggcgtggccgctgtcgaa
gccgccctgcccgctcaactgcatgccagcgccgaggaaatcgaagcggtgcggcagcgc
gtacaacggttcgaccctaccggcatcgccagcctcgatctccgcgattgcctgttctgc
cagctgtcccagttctcgttcgagacgccgcatcgcgaactcgcgatccgcatcgtcaac
gaggagctggagctgctggcgcgcaacgacgcggcgaagatcgcccgccgcctgaaggcg
cccgaggcagacgttgcggcagccgccgccctgatccgcagcctggacccgcgccccggt
gcggcactggatgccacgcccgtggaatacgtggcgccggacgtctacgcacgccgggag
aacggacgctggcaggtcagtctgaatccggatgcccagccgcgccttggcctcaaccag
cactactgcaacctcattgcccgcgcgcgcggcgacgatgccacgtggatgaagggccag
ctgcaggaagcccgttggttgctgaagagcctgcaatcccgtgcggaaacgctgcagaag
gtggcggaggtgatcgtccggcggcaaagcgcgttcctcgactacggcccggaagccatg
catccgctcgtgctccgcgaggtcgccgaggaagtgggcatgcacgaatcgaccatttcc
cgcgtcaccacccgcaagtacatgcacacgccacgcggcaccttcgagctcaaacacttt
ttttccagcggcgtcgccaccgaagacggcggcagtgcgtcggccacggccatccaggcc
atgctgcgcaagctgatcctcggcgaagacgcgcgccgccccctgtccgaccaggccctg
gcggaagaactgcatcgacgcggcattcaggtcgcccgacgtacggtggccaagtaccgc
gaagcgatgcgcatccccagttccagcgaacgtattcgcgccagttga
DBGET
integrated database retrieval system
