Companilactobacillus farciminis: LF20184_00280
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Entry
LF20184_00280 CDS
T06098
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lfm
Companilactobacillus farciminis
Brite
KEGG Orthology (KO) [BR:
lfm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfm03016
]
LF20184_00280
Transfer RNA biogenesis [BR:
lfm03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LF20184_00280
Prokaryotic type
Methyltransferases
LF20184_00280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
AIG1
Dynamin_N
GTP_EFTU
RsgA_GTPase
Ras
Roc
AAA_22
SRPRB
AAA_24
AAA_15
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ATO45290
LinkDB
All DBs
Position
complement(57902..59293)
Genome browser
AA seq
463 aa
AA seq
DB search
MPSSVTEYDTIAAISTPPGEGAISIVRMSGDQAVDVAKKVFKGRDLAKVASHTINYGHIY
DPSDNSLIDEVMVSVMRAPKTFTREDIIEINTHGGIVATNKVLQLLLAYGARMAEPGEFT
KRAFLNGRIDLTQAESVMDLIRAKTDKAMQVAVNQLDGNLHHLISNLRQEILDSLAQVEV
NIDYPEYDTDQMTTKMLLEKAKTVSKSIDSLLKTADSGEILQHGLATAIVGKPNVGKSSL
LNRLLDEEKAIVTDVAGTTRDVVEQYVNIDGVPLKLIDTAGIRDTEDKVEKIGVERSKAA
LKGADLVILVLDSSRELEEDDLELLDATQDKRRIVIFNKVDLMPVITPESVVQLKADDVI
LKTSAIKNDGIETIKQTISKLFNAGIEDNNSSNVIITSARQAGLLRKAKNSLNDVISGIE
AGMPIDLVQIDMTACWDTLGEITGESYQDELITQLFSQFCLGK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgccaagttcagtaaccgaatatgacactattgctgcaatttcgacgcctcctggggaa
ggtgctatctcaatcgtcaggatgtcaggagatcaagcagttgatgttgccaaaaaagtt
ttcaagggacgtgatttagctaaagttgccagtcacacaatcaactacggtcacatttac
gaccctagcgataattcattgatcgatgaagttatggtctctgtaatgcgagcaccaaag
actttcacacgagaagatatcatcgaaataaatacccacgggggtatagttgctactaac
aaagttctgcaattattgttagcttatggcgctagaatggccgaaccaggtgaatttact
aaacgtgcctttttgaatggtcgaatcgatttaacgcaagctgaatcagtgatggatttg
atccgtgccaaaacggacaaagctatgcaagtagctgttaatcaattggatggaaatttg
catcatttgatctctaatttgcgtcaagaaatcttggattcattagctcaagtagaagta
aatattgattatccagaatatgatactgaccagatgactacgaagatgcttttagaaaaa
gccaagactgtcagcaagagtatcgacagtttattaaaaactgctgatagtggtgaaatt
ttacaacacggattagctaccgctattgtcggaaagccaaatgttggtaaatccagtttg
ttgaatcgccttttggatgaagagaaagcaatcgtaactgatgttgccgggacaactaga
gatgtggttgaacaatacgtcaatatcgacggtgtgcctttgaaattgatcgatacggct
ggtattcgtgatactgaagataaggttgaaaaaattggtgttgagcgttctaaggcagct
ttaaagggtgcagatttggtcattctagtcttagattctagtcgtgaattagaagaggac
gatttggaattactcgatgctactcaagataaacgtcgaatcgtaatctttaacaaagta
gatttgatgcctgtgattacgcctgaatcagtggtgcaattgaaagctgacgatgtgatc
ttgaagacttcagcaatcaagaatgacggaattgaaactatcaaacaaacaatcagtaaa
ttgttcaatgccggaatcgaagataacaacagcagcaacgtcattattactagtgctcgt
caagcaggtttgctccgtaaagccaaaaatagcctcaatgacgttatttctggaattgaa
gcaggaatgcctatcgatctagtacaaatcgatatgacggcttgctgggacactctcgga
gaaattaccggtgaaagttatcaagatgaattgattacacaactattctcacaattttgt
ttaggaaaataa
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